Start site selection at the TATA-less carbamoyl-phosphate synthase (glutamine-hydrolyzing)/aspartate carbamoyltransferase/dihydroorotase promoter

Richard Kollmar, Kristine A. Sukow, Stephen K. Sponagle, Peggy J. Farnham

Research output: Contribution to journalArticle

66 Citations (Scopus)

Abstract

Transcription of the carbamoyl-phosphate synthase (glutamine- hydrolyzing)/aspartate carbamoyltransferase/dihydroorotase (CAD) gene from the Syrian hamster, Mesocricetus auratus, starts at a single major site. We characterized the cis-acting elements that position RNA polymerase II at the correct start site in the CAD promoter. Sequence alignment showed that the CAD promoter lacks a TATA box, but contains a consensus initiator. Mutational analysis of the CAD promoter demonstrated that the sequences between -81 and +26 were sufficient for accurate and efficient transcription in vitro and in vivo; binding sites for the transcription factor Sp1 around -70 and -49 were necessary for transcriptional activity. The binding site at -49 directed initiation about 50 base pairs downstream. A ubiquitous activator protein, Honk, bound to the CAD promoter between -30 and -12, but did not participate in start site selection. The sequences around +1, which contain the consensus initiator, contributed to promoter activity; however, the presence of a consensus initiator in this region was neither necessary nor sufficient for transcription. We concluded from these results that the Sp1 binding site at - 49 substituted for the missing TATA box and played a major role in start site selection at the CAD promoter.

Original languageEnglish (US)
Pages (from-to)2252-2257
Number of pages6
JournalJournal of Biological Chemistry
Volume269
Issue number3
StatePublished - Jan 21 1994
Externally publishedYes

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Carbamoyl-Phosphate Synthase (Glutamine-Hydrolyzing)
Dihydroorotase
Aspartate Carbamoyltransferase
Carboxyl and Carbamoyl Transferases
Site selection
Transcription
TATA Box
Binding Sites
Mesocricetus
Sp1 Transcription Factor
RNA Polymerase II
Sequence Alignment
Base Pairing
Genes

ASJC Scopus subject areas

  • Biochemistry

Cite this

Start site selection at the TATA-less carbamoyl-phosphate synthase (glutamine-hydrolyzing)/aspartate carbamoyltransferase/dihydroorotase promoter. / Kollmar, Richard; Sukow, Kristine A.; Sponagle, Stephen K.; Farnham, Peggy J.

In: Journal of Biological Chemistry, Vol. 269, No. 3, 21.01.1994, p. 2252-2257.

Research output: Contribution to journalArticle

Kollmar, Richard ; Sukow, Kristine A. ; Sponagle, Stephen K. ; Farnham, Peggy J. / Start site selection at the TATA-less carbamoyl-phosphate synthase (glutamine-hydrolyzing)/aspartate carbamoyltransferase/dihydroorotase promoter. In: Journal of Biological Chemistry. 1994 ; Vol. 269, No. 3. pp. 2252-2257.
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