Role of glycosylation on the ensemble of conformations in the MUC1 immunodominant epitope

Jaideep Singh, Cheenou Her, Nitin Supekar, Geert Jan Boons, Viswanathan V. Krishnan, Cory L. Brooks

Research output: Contribution to journalArticle

Abstract

MUC1 is a membrane glycoprotein, which in adenocarninomas is overexpressed and exhibits truncated O-glycosylation. Overexpression and altered glycosylation make MUC1 into a candidate for immunotherapy. Monoclonal antibodies directed against MUC1 frequently bind an immunodominant epitope that contains a single site for O-glycosylation. Glycosylation with tumor carbohydrate antigens such as the Tn-antigen (GalNAc-O-Ser/Thr) results in antibodies binding with higher affinity. One proposed model to explain the enhanced affinity of antibodies for the glycosylated antigen is that the addition of a carbohydrate alters the conformational properties, favoring a binding-competent state. The conformational effects associated with Tn glycosylation of the MUC1 antigen was investigated using solution-state NMR and molecular dynamics. NMR experiments revealed distinct substructures of the glycosylated MUC1 peptides compared with the unglycosylated peptide. Molecular dynamics simulations of the MUC1 glycopeptide and peptide revealed distinguishing differences in their conformational preferences. Furthermore, the glycopeptide displayed a smaller conformational sampling compared with the peptide, suggesting that the glycopeptide sampled a narrower conformational space and is less dynamic. A comparison of the computed ensemble of conformations assuming random distribution, NMR models, and molecular dynamics simulations indicated that the MUC1 glycopeptide and aglycosylated peptide sampled structurally distinctly ensembles and that these ensembles were different from that of the random coil. Together, these data support the hypothesis that that conformational pre-selection could be an essential feature of these peptides that dictates the binding affinities to MUC1 specific antibodies.

Original languageEnglish (US)
Article numbere3229
JournalJournal of Peptide Science
DOIs
StateAccepted/In press - Jan 1 2019

Fingerprint

Glycosylation
Immunodominant Epitopes
Conformations
Glycopeptides
Peptides
Molecular Dynamics Simulation
Molecular dynamics
Nuclear magnetic resonance
Antigens
Antibodies
Carbohydrates
Antibody Affinity
Membrane Glycoproteins
Computer simulation
Neoplasm Antigens
Immunotherapy
Tumors
Monoclonal Antibodies
Sampling

Keywords

  • antibody-antigen
  • ensemble
  • glycobiology
  • immunotherapy
  • mucin
  • NMR

ASJC Scopus subject areas

  • Structural Biology
  • Biochemistry
  • Molecular Medicine
  • Molecular Biology
  • Pharmacology
  • Drug Discovery
  • Organic Chemistry

Cite this

Role of glycosylation on the ensemble of conformations in the MUC1 immunodominant epitope. / Singh, Jaideep; Her, Cheenou; Supekar, Nitin; Boons, Geert Jan; Krishnan, Viswanathan V.; Brooks, Cory L.

In: Journal of Peptide Science, 01.01.2019.

Research output: Contribution to journalArticle

Singh, Jaideep ; Her, Cheenou ; Supekar, Nitin ; Boons, Geert Jan ; Krishnan, Viswanathan V. ; Brooks, Cory L. / Role of glycosylation on the ensemble of conformations in the MUC1 immunodominant epitope. In: Journal of Peptide Science. 2019.
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