Quantifying size distributions of nanolipoprotein particles with single-particle analysis and molecular dynamic simulations

Craig D. Blanchette, Richard Law, W. Henry Benner, Joseph B. Pesavento, Jenny A. Cappuccio, Vicki Walsworth, Edward A. Kuhn, Michele Corzett, Brett A. Chromy, Brent W. Segelke, Matthew A Coleman, Graham Bench, Paul D. Hoeprich, Todd A. Sulchek

Research output: Contribution to journalArticle

38 Citations (Scopus)

Abstract

Self-assembly of purified apolipoproteins and phospholipids results in the formation of nanometer-sized lipoprotein complexes, referred to as nanolipoprotein particles (NLPs). These bilayer constructs are fully soluble in aqueous environments and hold great promise as a model system to aid in solubilizing membrane proteins. Size variability in the self-assembly process has been recognized for some time, yet limited studies have been conducted to examine this phenomenon. Understanding the source of this heterogeneity may lead to methods to mitigate heterogeneity or to control NLP size, which may be important for tailoring NLPs for specific membrane proteins. Here, we have used atomic force microscopy, ion mobility spectrometry, and transmission electron microscopy to quantify NLP size distributions on the single-particle scale, specifically focusing on assemblies with 1, 2-dimyristoyl-sn-glycero-3-phosphocholine (DMPC) and a recombinant apolipoprotein E variant containing the N-terminal 22 kDa fragment (E422k). Four discrete sizes of E422k/DMPC NLPs were identified by all three techniques, with diameters centered at ∼ 4.5, 19, 23.5, and 28 nm. Computer simulations suggest that these sizes are related to the structure and number of E422k lipoproteins surrounding the NLPs and particles with an odd number of lipoproteins are consistent with the double-belt model, in which at least one lipoprotein adopts a hairpin structure.

Original languageEnglish (US)
Pages (from-to)1420-1430
Number of pages11
JournalJournal of Lipid Research
Volume49
Issue number7
DOIs
StatePublished - 2008
Externally publishedYes

Fingerprint

Molecular Dynamics Simulation
Lipoproteins
Molecular dynamics
Phosphorylcholine
Computer simulation
Particle Size
Self assembly
Membrane Proteins
Apolipoproteins
Atomic Force Microscopy
Apolipoproteins E
Transmission Electron Microscopy
Particle size analysis
Computer Simulation
Spectrometry
Particles (particulate matter)
Atomic force microscopy
Phospholipids
Spectrum Analysis
Particle size

Keywords

  • Apolipoproteins
  • Atomic force microscopy
  • High density lipoproteins
  • Ion mobility spectrometry
  • Nanodiscs

ASJC Scopus subject areas

  • Biochemistry
  • Cell Biology
  • Endocrinology

Cite this

Blanchette, C. D., Law, R., Benner, W. H., Pesavento, J. B., Cappuccio, J. A., Walsworth, V., ... Sulchek, T. A. (2008). Quantifying size distributions of nanolipoprotein particles with single-particle analysis and molecular dynamic simulations. Journal of Lipid Research, 49(7), 1420-1430. https://doi.org/10.1194/jlr.M700586-JLR200

Quantifying size distributions of nanolipoprotein particles with single-particle analysis and molecular dynamic simulations. / Blanchette, Craig D.; Law, Richard; Benner, W. Henry; Pesavento, Joseph B.; Cappuccio, Jenny A.; Walsworth, Vicki; Kuhn, Edward A.; Corzett, Michele; Chromy, Brett A.; Segelke, Brent W.; Coleman, Matthew A; Bench, Graham; Hoeprich, Paul D.; Sulchek, Todd A.

In: Journal of Lipid Research, Vol. 49, No. 7, 2008, p. 1420-1430.

Research output: Contribution to journalArticle

Blanchette, CD, Law, R, Benner, WH, Pesavento, JB, Cappuccio, JA, Walsworth, V, Kuhn, EA, Corzett, M, Chromy, BA, Segelke, BW, Coleman, MA, Bench, G, Hoeprich, PD & Sulchek, TA 2008, 'Quantifying size distributions of nanolipoprotein particles with single-particle analysis and molecular dynamic simulations', Journal of Lipid Research, vol. 49, no. 7, pp. 1420-1430. https://doi.org/10.1194/jlr.M700586-JLR200
Blanchette, Craig D. ; Law, Richard ; Benner, W. Henry ; Pesavento, Joseph B. ; Cappuccio, Jenny A. ; Walsworth, Vicki ; Kuhn, Edward A. ; Corzett, Michele ; Chromy, Brett A. ; Segelke, Brent W. ; Coleman, Matthew A ; Bench, Graham ; Hoeprich, Paul D. ; Sulchek, Todd A. / Quantifying size distributions of nanolipoprotein particles with single-particle analysis and molecular dynamic simulations. In: Journal of Lipid Research. 2008 ; Vol. 49, No. 7. pp. 1420-1430.
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