Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207 T)

kurt Labutti, Shanmugam Mayilraj, Alicia Clum, Susan Lucas, Tijana Glavina del Rio, Matt Nolan, Hope Tice, Jan Fang Cheng, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati, Lynne Goodwin, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Yun Juan ChangCynthia D. Jeffries, Manfred Rohde, Stefan Spring, Markus Göker, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, Alla Lapidus

Research output: Contribution to journalArticle

7 Scopus citations

Abstract

Dethiosulfovibrio peptidovorans Magot et al. 1997 is the type species of the genus Dethiosul-fovibrio of the family Synergistaceae in the recently created phylum Synergistetes. The strictly anaerobic, vibriod, thiosulfate-reducing bacterium utilizes peptides and amino acids, but nei-ther sugars nor fatty acids. It was isolated from an offshore oil well where it was been re-ported to be involved in pitting corrosion of mild steel. Initially, this bacterium was described as a distant relative of the genus Thermoanaerobacter, but was not assigned to a genus, it was subsequently placed into the novel phylum Synergistetes. A large number of repeats in the genome sequence prevented an economically justifiable closure of the last gaps. This is only the third published genome from a member of the phylum Synergistetes. The 2,576,359 bp long genome consists of three contigs with 2,458 protein-coding and 59 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)85-92
Number of pages8
JournalStandards in Genomic Sciences
Volume3
Issue number1
DOIs
StatePublished - 2010

Keywords

  • Anaerobic
  • GEBA
  • H S producing
  • Motile
  • Peptide uti-lization
  • Synergistaceae
  • Synergistetes
  • Thiosulfate-reducing
  • Vibrio-shaped

ASJC Scopus subject areas

  • Genetics

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  • Cite this

    Labutti, K., Mayilraj, S., Clum, A., Lucas, S., del Rio, T. G., Nolan, M., Tice, H., Cheng, J. F., Pitluck, S., Liolios, K., Ivanova, N., Mavromatis, K., Mikhailova, N., Pati, A., Goodwin, L., Chen, A., Palaniappan, K., Land, M., Hauser, L., ... Lapidus, A. (2010). Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207 T). Standards in Genomic Sciences, 3(1), 85-92. https://doi.org/10.4056/sigs.1092865