Omu, a metabolomics count data analysis tool for intuitive figures and convenient metadata collection

Connor R. Tiffany, Andreas J Baumler

Research output: Contribution to journalArticle

1 Citation (Scopus)

Abstract

Metabolomics is a powerful tool for measuring the functional output of the microbiota. Currently, there are few established workflows for analysis downstream of metabolite identification. Here, we introduce omu, an R package designed for assigning compound hierarchies and linking compounds to corresponding enzyme and gene annotations for organisms of interest.

Original languageEnglish (US)
Article numbere00129-19
JournalMicrobiology Resource Announcements
Volume8
Issue number15
DOIs
StatePublished - Jan 1 2019

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Molecular Sequence Annotation
Metabolomics
Workflow
Microbiota
Enzymes
Metadata

ASJC Scopus subject areas

  • Molecular Biology
  • Immunology and Microbiology (miscellaneous)
  • Genetics

Cite this

Omu, a metabolomics count data analysis tool for intuitive figures and convenient metadata collection. / Tiffany, Connor R.; Baumler, Andreas J.

In: Microbiology Resource Announcements, Vol. 8, No. 15, e00129-19, 01.01.2019.

Research output: Contribution to journalArticle

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