Non-contiguous finished genome sequence of the opportunistic oral pathogen Prevotella multisaccharivorax type strain (PPPA20 t)

Amrita Pati, Sabine Gronow, Megan Lu, Alla Lapidus, Matt Nolan, Susan Lucas, Nancy Hammon, Shweta Deshpande, Jan Fang Cheng, Roxanne Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Konstantinos Mavromatis, Natalia Mikhailova, Marcel Huntemann, Amy Chen, Krishna PalaniappanMiriam Land, Loren Hauser, John C. Detter, Evelyne Marie Brambilla, Manfred Rohde, Markus Göker, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, Natalia Ivanova

Research output: Contribution to journalArticle

1 Scopus citations

Abstract

Prevotella multisaccharivorax Sakamoto et al. 2005 is a species of the large genus Prevotella, which belongs to the family Prevotellaceae. The species is of medical interest because its members are able to cause diseases in the human oral cavity such as periodontitis, root caries and others. Although 77 Prevotella genomes have already been sequenced or are targeted for sequencing, this is only the second completed genome sequence of a type strain of a species within the genus Prevotella to be published. The 3,388,644 bp long genome is assembled in three non-contiguous contigs, harbors 2,876 protein-coding and 75 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)41-49
Number of pages9
JournalStandards in Genomic Sciences
Volume5
Issue number1
DOIs
StatePublished - 2011

Keywords

  • Chemoorganotroph-ic
  • GEBA
  • Gram-negative
  • Mesophilic
  • Non-motile
  • Obligately anaerobic
  • Opportunistic pathogen
  • Prevotellaceae

ASJC Scopus subject areas

  • Genetics

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    Pati, A., Gronow, S., Lu, M., Lapidus, A., Nolan, M., Lucas, S., Hammon, N., Deshpande, S., Cheng, J. F., Tapia, R., Han, C., Goodwin, L., Pitluck, S., Liolios, K., Pagani, I., Mavromatis, K., Mikhailova, N., Huntemann, M., Chen, A., ... Ivanova, N. (2011). Non-contiguous finished genome sequence of the opportunistic oral pathogen Prevotella multisaccharivorax type strain (PPPA20 t). Standards in Genomic Sciences, 5(1), 41-49. https://doi.org/10.4056/sigs.2164949