Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3 T)

Sam Pitluck, Montri Yasawong, Brittany Held, Alla Lapidus, Matt Nolan, Alex Copeland, Susan Lucas, Tijana Glavina del Rio, Hope Tice, Jan Fang Cheng, Olga Chertkov, Lynne Goodwin, Roxane Tapia, Cliff Han, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati, Amy ChenKrishna Palaniappan, Miriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Rüdiger Pukall, Stefan Spring, Manfred Rohde, Johannes Sikorski, Markus Göker, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

7 Citations (Scopus)

Abstract

Aminomonas paucivorans Baena et al. 1999 is the type species of the genus Aminomonas, which belongs to the family Synergistaceae. The species is of interest because it is an asaccharolytic chemoorganotrophic bacterium which ferments quite a number of amino acids. This is the first finished genome sequence (with one gap in a rDNA region) of a member of the genus Aminomonas and the third sequence from the family Synergistaceae. The 2,630,120 bp long genome with its 2,433 protein-coding and 61 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)285-293
Number of pages9
JournalStandards in Genomic Sciences
Volume3
Issue number3
DOIs
StatePublished - 2010

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Genome
Encyclopedias
Bacteria
Archaea
Ribosomal DNA
RNA
Amino Acids
Genes
Proteins

Keywords

  • 'Synergistetes'
  • Asaccharolytic
  • Chemoorganotrophic
  • GEBA
  • Gram-negative
  • Mesophilic
  • Nonmotile
  • Obligate amino-acid-degrading
  • Strictly anaerobic
  • Synergistaceae

ASJC Scopus subject areas

  • Genetics

Cite this

Pitluck, S., Yasawong, M., Held, B., Lapidus, A., Nolan, M., Copeland, A., ... Klenk, H. P. (2010). Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3 T). Standards in Genomic Sciences, 3(3), 285-293. https://doi.org/10.4056/sigs.1253298

Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3 T). / Pitluck, Sam; Yasawong, Montri; Held, Brittany; Lapidus, Alla; Nolan, Matt; Copeland, Alex; Lucas, Susan; del Rio, Tijana Glavina; Tice, Hope; Cheng, Jan Fang; Chertkov, Olga; Goodwin, Lynne; Tapia, Roxane; Han, Cliff; Liolios, Konstantinos; Ivanova, Natalia; Mavromatis, Konstantinos; Ovchinnikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Pukall, Rüdiger; Spring, Stefan; Rohde, Manfred; Sikorski, Johannes; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 3, No. 3, 2010, p. 285-293.

Research output: Contribution to journalArticle

Pitluck, S, Yasawong, M, Held, B, Lapidus, A, Nolan, M, Copeland, A, Lucas, S, del Rio, TG, Tice, H, Cheng, JF, Chertkov, O, Goodwin, L, Tapia, R, Han, C, Liolios, K, Ivanova, N, Mavromatis, K, Ovchinnikova, G, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Pukall, R, Spring, S, Rohde, M, Sikorski, J, Göker, M, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2010, 'Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3 T)', Standards in Genomic Sciences, vol. 3, no. 3, pp. 285-293. https://doi.org/10.4056/sigs.1253298
Pitluck, Sam ; Yasawong, Montri ; Held, Brittany ; Lapidus, Alla ; Nolan, Matt ; Copeland, Alex ; Lucas, Susan ; del Rio, Tijana Glavina ; Tice, Hope ; Cheng, Jan Fang ; Chertkov, Olga ; Goodwin, Lynne ; Tapia, Roxane ; Han, Cliff ; Liolios, Konstantinos ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Ovchinnikova, Galina ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Pukall, Rüdiger ; Spring, Stefan ; Rohde, Manfred ; Sikorski, Johannes ; Göker, Markus ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3 T). In: Standards in Genomic Sciences. 2010 ; Vol. 3, No. 3. pp. 285-293.
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