Abstract
Similar to genomic and proteomic platforms, metabolomic data acquisition and analysis is becoming a routine approach for investigating biological systems. However, computational approaches for metabolomic data analysis and integration are still maturing. Metabox is a bioinformatics toolbox for deep phenotyping analytics that combines data processing, statistical analysis, functional analysis and integrative exploration of metabolomic data within proteomic and transcriptomic contexts. With the number of options provided in each analysis module, it also supports data analysis of other 'omic' families. The toolbox is an R-based web application, and it is freely available at http://kwanjeeraw.github.io/metabox/under the GPL-3 license.
| Original language | English (US) |
|---|---|
| Article number | e0171046 |
| Journal | PLoS One |
| Volume | 12 |
| Issue number | 1 |
| DOIs | |
| State | Published - Jan 1 2017 |
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ASJC Scopus subject areas
- Medicine(all)
- Biochemistry, Genetics and Molecular Biology(all)
- Agricultural and Biological Sciences(all)
Cite this
Metabox : A toolbox for metabolomic data analysis, interpretation and integrative exploration. / Wanichthanarak, Kwanjeera; Fan, Sili; Grapov, Dmitry; Barupal, Dinesh Kumar; Fiehn, Oliver.
In: PLoS One, Vol. 12, No. 1, e0171046, 01.01.2017.Research output: Contribution to journal › Article
}
TY - JOUR
T1 - Metabox
T2 - A toolbox for metabolomic data analysis, interpretation and integrative exploration
AU - Wanichthanarak, Kwanjeera
AU - Fan, Sili
AU - Grapov, Dmitry
AU - Barupal, Dinesh Kumar
AU - Fiehn, Oliver
PY - 2017/1/1
Y1 - 2017/1/1
N2 - Similar to genomic and proteomic platforms, metabolomic data acquisition and analysis is becoming a routine approach for investigating biological systems. However, computational approaches for metabolomic data analysis and integration are still maturing. Metabox is a bioinformatics toolbox for deep phenotyping analytics that combines data processing, statistical analysis, functional analysis and integrative exploration of metabolomic data within proteomic and transcriptomic contexts. With the number of options provided in each analysis module, it also supports data analysis of other 'omic' families. The toolbox is an R-based web application, and it is freely available at http://kwanjeeraw.github.io/metabox/under the GPL-3 license.
AB - Similar to genomic and proteomic platforms, metabolomic data acquisition and analysis is becoming a routine approach for investigating biological systems. However, computational approaches for metabolomic data analysis and integration are still maturing. Metabox is a bioinformatics toolbox for deep phenotyping analytics that combines data processing, statistical analysis, functional analysis and integrative exploration of metabolomic data within proteomic and transcriptomic contexts. With the number of options provided in each analysis module, it also supports data analysis of other 'omic' families. The toolbox is an R-based web application, and it is freely available at http://kwanjeeraw.github.io/metabox/under the GPL-3 license.
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U2 - 10.1371/journal.pone.0171046
DO - 10.1371/journal.pone.0171046
M3 - Article
VL - 12
JO - PLoS One
JF - PLoS One
SN - 1932-6203
IS - 1
M1 - e0171046
ER -