Influence of sulfur oxidation state and steric bulk upon trifluoromethyl ketone (TFK) binding kinetics to carboxylesterases and fatty acid amide hydrolase (FAAH)

Craig E. Wheelock, Kosuke Nishi, Andy Ying, Paul D. Jones, Michael E. Colvin, Marilyn M. Olmstead, Bruce D. Hammock

Research output: Contribution to journalArticle

8 Citations (Scopus)

Abstract

Carboxylesterases metabolize numerous exogenous and endogenous ester-containing compounds including the chemotherapeutic agent CPT-11, anti-influenza viral agent oseltamivir, and many agrochemicals. Trifluoromethyl ketone (TFK)-containing compounds with a sulfur atom β to the ketone moiety are some of the most potent carboxylesterase and amidase inhibitors identified to date. This study examined the effects of alkyl chain length (i.e., steric effects) and sulfur oxidation state upon TFK inhibitor potency (IC50) and binding kinetics (ki). The selective carboxylesterase inhibitor benzil was used as a non-TFK containing control. These effects were examined using two commercial esterases (porcine and rabbit liver esterase) and two human recombinant esterases (hCE-1 and hCE-2) as well as human recombinant fatty acid amide hydrolase (FAAH). In addition, the inhibition mechanism was examined using a combination of 1H NMR, X-ray crystallography, and ab initio calculations. Overall, the data show that while sulfur oxidation state profoundly affects both inhibitor potency and binding kinetics, the steric effects dominate and override the contributions of sulfur oxidation. In addition, the data suggest that inclusion of a sulfur atom β to the ketone contributes an increase (∼5-fold) in inhibitor potency due to effects upon ketone hydration and/or intramolecular hydrogen bond formation. These results provide further information on the nature of the TFK binding interaction and will be useful in increasing our understanding of this basic biochemical process.

Original languageEnglish (US)
Pages (from-to)2114-2130
Number of pages17
JournalBioorganic and Medicinal Chemistry
Volume16
Issue number4
DOIs
StatePublished - Feb 15 2008

Fingerprint

Carboxylic Ester Hydrolases
Ketones
Sulfur
Oxidation
Kinetics
Esterases
Carboxylesterase
irinotecan
Corrosion inhibitors
amidase
Antiviral agents
Biochemical Phenomena
Agrochemicals
Oseltamivir
Atoms
X ray crystallography
X Ray Crystallography
fatty-acid amide hydrolase
Chain length
Hydration

Keywords

  • Ab initio calculations
  • Benzil
  • Carboxylesterase
  • Esterase
  • FAAH
  • Fatty acid amide hydrolase
  • Inhibitor
  • Intramolecular hydrogen bond
  • Kinetics
  • Sulfur
  • TFK
  • Trifluoromethyl ketone

ASJC Scopus subject areas

  • Biochemistry
  • Molecular Biology
  • Organic Chemistry
  • Drug Discovery
  • Pharmaceutical Science

Cite this

Influence of sulfur oxidation state and steric bulk upon trifluoromethyl ketone (TFK) binding kinetics to carboxylesterases and fatty acid amide hydrolase (FAAH). / Wheelock, Craig E.; Nishi, Kosuke; Ying, Andy; Jones, Paul D.; Colvin, Michael E.; Olmstead, Marilyn M.; Hammock, Bruce D.

In: Bioorganic and Medicinal Chemistry, Vol. 16, No. 4, 15.02.2008, p. 2114-2130.

Research output: Contribution to journalArticle

Wheelock, Craig E. ; Nishi, Kosuke ; Ying, Andy ; Jones, Paul D. ; Colvin, Michael E. ; Olmstead, Marilyn M. ; Hammock, Bruce D. / Influence of sulfur oxidation state and steric bulk upon trifluoromethyl ketone (TFK) binding kinetics to carboxylesterases and fatty acid amide hydrolase (FAAH). In: Bioorganic and Medicinal Chemistry. 2008 ; Vol. 16, No. 4. pp. 2114-2130.
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AU - Nishi, Kosuke

AU - Ying, Andy

AU - Jones, Paul D.

AU - Colvin, Michael E.

AU - Olmstead, Marilyn M.

AU - Hammock, Bruce D.

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