Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT), and emendation of the species Turneriella parva

Erko Stackebrandt; Olga Chertkov; Alla Lapidus; Matt Nolan; Susan Lucas; Nancy Hammon; Shweta Deshpande; Jan Fang Cheng; Roxanne Tapia; Lynne A. Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Marcel Huntemann; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Chongle Pan; Manfred Rohde; Sabine Gronow; Markus Göker; John C. Detter; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Tanja Woyke; Nikos C. Kyrpides; Hans Peter Klenk

doi:10.4056/sigs.3617113

Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H^T), and emendation of the species Turneriella parva

Erko Stackebrandt, Olga Chertkov, Alla Lapidus, Matt Nolan, Susan Lucas, Nancy Hammon, Shweta Deshpande, Jan Fang Cheng, Roxanne Tapia, Lynne A. Goodwin, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Marcel Huntemann, Amrita Pati, Amy Chen, Krishna PalaniappanMiriam Land, Chongle Pan, Manfred Rohde, Sabine Gronow, Markus Göker, John C. Detter, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Tanja Woyke, Nikos C. Kyrpides, Hans Peter Klenk

Medical Microbiology and Immunology

Research output: Contribution to journal › Article

6 Scopus citations

Abstract

Turneriella parva Levett et al. 2005 is the only species of the genus Turneriella which was es-tablished as a result of the reclassification of Leptospira parva Hovind-Hougen et al. 1982. Together with Leptonema and Leptospira, Turneriella constitutes the family Leptospiraceae, within the order Spirochaetales. Here we describe the features of this free-living aerobic spi-rochete together with the complete genome sequence and annotation. This is the first com-plete genome sequence of a member of the genus Turneriella and the 13th member of the family Leptospiraceae for which a complete or draft genome sequence is now available. The 4,409,302 bp long genome with its 4,169 protein-coding and 45 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original language	English (US)
Pages (from-to)	228-238
Number of pages	11
Journal	Standards in Genomic Sciences
Volume	8
Issue number	2
DOIs	https://doi.org/10.4056/sigs.3617113
State	Published - 2013

Keywords

Aerobic
Axial filaments
Flexible
GEBA
Gram-negative
Helical
Leptospiraceae
Mesophile
Motile
Non-sporulating

ASJC Scopus subject areas

Genetics

Access to Document

10.4056/sigs.3617113

Fingerprint Dive into the research topics of 'Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H<sup>T</sup>), and emendation of the species Turneriella parva'. Together they form a unique fingerprint.

Cite this

Stackebrandt, E., Chertkov, O., Lapidus, A., Nolan, M., Lucas, S., Hammon, N., Deshpande, S., Cheng, J. F., Tapia, R., Goodwin, L. A., Pitluck, S., Liolios, K., Pagani, I., Ivanova, N., Mavromatis, K., Mikhailova, N., Huntemann, M., Pati, A., Chen, A., ... Klenk, H. P. (2013). Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H^T), and emendation of the species Turneriella parva. Standards in Genomic Sciences, 8(2), 228-238. https://doi.org/10.4056/sigs.3617113

Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H^T), and emendation of the species Turneriella parva. / Stackebrandt, Erko; Chertkov, Olga; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan Fang; Tapia, Roxanne; Goodwin, Lynne A.; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Huntemann, Marcel; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Pan, Chongle; Rohde, Manfred; Gronow, Sabine; Göker, Markus; Detter, John C.; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Woyke, Tanja; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 8, No. 2, 2013, p. 228-238.

Research output: Contribution to journal › Article

Stackebrandt, E, Chertkov, O, Lapidus, A, Nolan, M, Lucas, S, Hammon, N, Deshpande, S, Cheng, JF, Tapia, R, Goodwin, LA, Pitluck, S, Liolios, K, Pagani, I, Ivanova, N, Mavromatis, K, Mikhailova, N, Huntemann, M, Pati, A, Chen, A, Palaniappan, K, Land, M, Pan, C, Rohde, M, Gronow, S, Göker, M, Detter, JC, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Woyke, T, Kyrpides, NC & Klenk, HP 2013, 'Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H^T), and emendation of the species Turneriella parva', Standards in Genomic Sciences, vol. 8, no. 2, pp. 228-238. https://doi.org/10.4056/sigs.3617113

Stackebrandt, Erko ; Chertkov, Olga ; Lapidus, Alla ; Nolan, Matt ; Lucas, Susan ; Hammon, Nancy ; Deshpande, Shweta ; Cheng, Jan Fang ; Tapia, Roxanne ; Goodwin, Lynne A. ; Pitluck, Sam ; Liolios, Konstantinos ; Pagani, Ioanna ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Mikhailova, Natalia ; Huntemann, Marcel ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Pan, Chongle ; Rohde, Manfred ; Gronow, Sabine ; Göker, Markus ; Detter, John C. ; Bristow, James ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Woyke, Tanja ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H^T), and emendation of the species Turneriella parva. In: Standards in Genomic Sciences. 2013 ; Vol. 8, No. 2. pp. 228-238.

@article{453462e881a6400a8af65e09f9658a04,

title = "Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT), and emendation of the species Turneriella parva",

abstract = "Turneriella parva Levett et al. 2005 is the only species of the genus Turneriella which was es-tablished as a result of the reclassification of Leptospira parva Hovind-Hougen et al. 1982. Together with Leptonema and Leptospira, Turneriella constitutes the family Leptospiraceae, within the order Spirochaetales. Here we describe the features of this free-living aerobic spi-rochete together with the complete genome sequence and annotation. This is the first com-plete genome sequence of a member of the genus Turneriella and the 13th member of the family Leptospiraceae for which a complete or draft genome sequence is now available. The 4,409,302 bp long genome with its 4,169 protein-coding and 45 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.",

keywords = "Aerobic, Axial filaments, Flexible, GEBA, Gram-negative, Helical, Leptospiraceae, Mesophile, Motile, Non-sporulating",

author = "Erko Stackebrandt and Olga Chertkov and Alla Lapidus and Matt Nolan and Susan Lucas and Nancy Hammon and Shweta Deshpande and Cheng, {Jan Fang} and Roxanne Tapia and Goodwin, {Lynne A.} and Sam Pitluck and Konstantinos Liolios and Ioanna Pagani and Natalia Ivanova and Konstantinos Mavromatis and Natalia Mikhailova and Marcel Huntemann and Amrita Pati and Amy Chen and Krishna Palaniappan and Miriam Land and Chongle Pan and Manfred Rohde and Sabine Gronow and Markus G{\"o}ker and Detter, {John C.} and James Bristow and Eisen, {Jonathan A} and Victor Markowitz and Philip Hugenholtz and Tanja Woyke and Kyrpides, {Nikos C.} and Klenk, {Hans Peter}",

year = "2013",

doi = "10.4056/sigs.3617113",

language = "English (US)",

volume = "8",

pages = "228--238",

journal = "Environmental Microbiomes",

issn = "1944-3277",

publisher = "BioMed Central Ltd.",

number = "2",

}

TY - JOUR

T1 - Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT), and emendation of the species Turneriella parva

AU - Stackebrandt, Erko

AU - Chertkov, Olga

AU - Lapidus, Alla

AU - Nolan, Matt

AU - Lucas, Susan

AU - Hammon, Nancy

AU - Deshpande, Shweta

AU - Cheng, Jan Fang

AU - Tapia, Roxanne

AU - Goodwin, Lynne A.

AU - Pitluck, Sam

AU - Liolios, Konstantinos

AU - Pagani, Ioanna

AU - Ivanova, Natalia

AU - Mavromatis, Konstantinos

AU - Mikhailova, Natalia

AU - Huntemann, Marcel

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Pan, Chongle

AU - Rohde, Manfred

AU - Gronow, Sabine

AU - Göker, Markus

AU - Detter, John C.

AU - Bristow, James

AU - Eisen, Jonathan A

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Woyke, Tanja

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

PY - 2013

Y1 - 2013

N2 - Turneriella parva Levett et al. 2005 is the only species of the genus Turneriella which was es-tablished as a result of the reclassification of Leptospira parva Hovind-Hougen et al. 1982. Together with Leptonema and Leptospira, Turneriella constitutes the family Leptospiraceae, within the order Spirochaetales. Here we describe the features of this free-living aerobic spi-rochete together with the complete genome sequence and annotation. This is the first com-plete genome sequence of a member of the genus Turneriella and the 13th member of the family Leptospiraceae for which a complete or draft genome sequence is now available. The 4,409,302 bp long genome with its 4,169 protein-coding and 45 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Turneriella parva Levett et al. 2005 is the only species of the genus Turneriella which was es-tablished as a result of the reclassification of Leptospira parva Hovind-Hougen et al. 1982. Together with Leptonema and Leptospira, Turneriella constitutes the family Leptospiraceae, within the order Spirochaetales. Here we describe the features of this free-living aerobic spi-rochete together with the complete genome sequence and annotation. This is the first com-plete genome sequence of a member of the genus Turneriella and the 13th member of the family Leptospiraceae for which a complete or draft genome sequence is now available. The 4,409,302 bp long genome with its 4,169 protein-coding and 45 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - Aerobic

KW - Axial filaments

KW - Flexible

KW - GEBA

KW - Gram-negative

KW - Helical

KW - Leptospiraceae

KW - Mesophile

KW - Motile

KW - Non-sporulating

UR - http://www.scopus.com/inward/record.url?scp=84879326915&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=84879326915&partnerID=8YFLogxK

U2 - 10.4056/sigs.3617113

DO - 10.4056/sigs.3617113

M3 - Article

C2 - 23991255

AN - SCOPUS:84879326915

VL - 8

SP - 228

EP - 238

JO - Environmental Microbiomes

JF - Environmental Microbiomes

SN - 1944-3277

IS - 2

ER -