Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (HT), and emendation of the species Turneriella parva

Erko Stackebrandt; Olga Chertkov; Alla Lapidus; Matt Nolan; Susan Lucas; Nancy Hammon; Shweta Deshpande; Jan Fang Cheng; Roxanne Tapia; Lynne A. Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Marcel Huntemann; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Chongle Pan; Manfred Rohde; Sabine Gronow; Markus Göker; John C. Detter; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Tanja Woyke; Nikos C. Kyrpides; Hans Peter Klenk

doi:10.4056/sigs.3617113

Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H^T), and emendation of the species Turneriella parva

Erko Stackebrandt, Olga Chertkov, Alla Lapidus, Matt Nolan, Susan Lucas, Nancy Hammon, Shweta Deshpande, Jan Fang Cheng, Roxanne Tapia, Lynne A. Goodwin, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Marcel Huntemann, Amrita Pati, Amy Chen, Krishna PalaniappanMiriam Land, Chongle Pan, Manfred Rohde, Sabine Gronow, Markus Göker, John C. Detter, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Tanja Woyke, Nikos C. Kyrpides, Hans Peter Klenk

Medical Microbiology and Immunology

Research output: Contribution to journal › Article › peer-review

7 Scopus citations

Abstract

Turneriella parva Levett et al. 2005 is the only species of the genus Turneriella which was es-tablished as a result of the reclassification of Leptospira parva Hovind-Hougen et al. 1982. Together with Leptonema and Leptospira, Turneriella constitutes the family Leptospiraceae, within the order Spirochaetales. Here we describe the features of this free-living aerobic spi-rochete together with the complete genome sequence and annotation. This is the first com-plete genome sequence of a member of the genus Turneriella and the 13th member of the family Leptospiraceae for which a complete or draft genome sequence is now available. The 4,409,302 bp long genome with its 4,169 protein-coding and 45 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original language	English (US)
Pages (from-to)	228-238
Number of pages	11
Journal	Standards in Genomic Sciences
Volume	8
Issue number	2
DOIs	https://doi.org/10.4056/sigs.3617113
State	Published - 2013

Keywords

Aerobic
Axial filaments
Flexible
GEBA
Gram-negative
Helical
Leptospiraceae
Mesophile
Motile
Non-sporulating

ASJC Scopus subject areas

Genetics

Access to Document

10.4056/sigs.3617113

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Stackebrandt, E., Chertkov, O., Lapidus, A., Nolan, M., Lucas, S., Hammon, N., Deshpande, S., Cheng, J. F., Tapia, R., Goodwin, L. A., Pitluck, S., Liolios, K., Pagani, I., Ivanova, N., Mavromatis, K., Mikhailova, N., Huntemann, M., Pati, A., Chen, A., ... Klenk, H. P. (2013). Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H^T), and emendation of the species Turneriella parva. Standards in Genomic Sciences, 8(2), 228-238. https://doi.org/10.4056/sigs.3617113

Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H^T), and emendation of the species Turneriella parva. / Stackebrandt, Erko; Chertkov, Olga; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan Fang; Tapia, Roxanne; Goodwin, Lynne A.; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Huntemann, Marcel; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Pan, Chongle; Rohde, Manfred; Gronow, Sabine; Göker, Markus; Detter, John C.; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Woyke, Tanja; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 8, No. 2, 2013, p. 228-238.

Research output: Contribution to journal › Article › peer-review

Stackebrandt, E, Chertkov, O, Lapidus, A, Nolan, M, Lucas, S, Hammon, N, Deshpande, S, Cheng, JF, Tapia, R, Goodwin, LA, Pitluck, S, Liolios, K, Pagani, I, Ivanova, N, Mavromatis, K, Mikhailova, N, Huntemann, M, Pati, A, Chen, A, Palaniappan, K, Land, M, Pan, C, Rohde, M, Gronow, S, Göker, M, Detter, JC, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Woyke, T, Kyrpides, NC & Klenk, HP 2013, 'Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H^T), and emendation of the species Turneriella parva', Standards in Genomic Sciences, vol. 8, no. 2, pp. 228-238. https://doi.org/10.4056/sigs.3617113

Stackebrandt, Erko ; Chertkov, Olga ; Lapidus, Alla ; Nolan, Matt ; Lucas, Susan ; Hammon, Nancy ; Deshpande, Shweta ; Cheng, Jan Fang ; Tapia, Roxanne ; Goodwin, Lynne A. ; Pitluck, Sam ; Liolios, Konstantinos ; Pagani, Ioanna ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Mikhailova, Natalia ; Huntemann, Marcel ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Pan, Chongle ; Rohde, Manfred ; Gronow, Sabine ; Göker, Markus ; Detter, John C. ; Bristow, James ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Woyke, Tanja ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H^T), and emendation of the species Turneriella parva. In: Standards in Genomic Sciences. 2013 ; Vol. 8, No. 2. pp. 228-238.

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abstract = "Turneriella parva Levett et al. 2005 is the only species of the genus Turneriella which was es-tablished as a result of the reclassification of Leptospira parva Hovind-Hougen et al. 1982. Together with Leptonema and Leptospira, Turneriella constitutes the family Leptospiraceae, within the order Spirochaetales. Here we describe the features of this free-living aerobic spi-rochete together with the complete genome sequence and annotation. This is the first com-plete genome sequence of a member of the genus Turneriella and the 13th member of the family Leptospiraceae for which a complete or draft genome sequence is now available. The 4,409,302 bp long genome with its 4,169 protein-coding and 45 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.",

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AU - Nolan, Matt

AU - Lucas, Susan

AU - Hammon, Nancy

AU - Deshpande, Shweta

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AU - Eisen, Jonathan A

AU - Markowitz, Victor

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