Abstract
Several studies have identified the PTPN22 allelic variant 1858 C/T that encodes the R620W amino-acid change as a putative susceptibility factor in autoimmune diseases. The current study was undertaken to examine a large cohort of Finnish rheumatoid arthritis (RA) and juvenile idiopathic arthritis (JIA) subjects using both population control and, importantly, family-based association methods. The latter is particularly important when, as is the case for the 1858 C/T polymorphism, the frequency of the variant allele (T) differs in both major ancestral populations and in subpopulations. The analysis of rheumatoid factor-positive 1030 RA probands from Finland provides strong support for association of this variant in both population studies (allele specific odds ratio (OR) = 1.47, 95% confidence interval (CI) = 1.27 -1.70, P = 3 × 10-7) and in family studies (P<10-6). In contrast, no allelic association was seen with JIA (230 probands) and only weak evidence for a genotypic effect of 1858T homozygotes was observed in this population.
Original language | English (US) |
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Pages (from-to) | 720-722 |
Number of pages | 3 |
Journal | Genes and Immunity |
Volume | 6 |
Issue number | 8 |
DOIs | |
State | Published - Dec 2005 |
Keywords
- Juvenile idiopathic arthritis
- PTPN 22
- Rheumatoid arthritis
ASJC Scopus subject areas
- Genetics(clinical)
- Immunology
- Genetics