Extending the coverage of phenotypes in SNOMED CT through post-coordination

Ferdinand Dhombres, Rainer Winnenburg, James Case, Olivier Bodenreider

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)

Abstract

Objectives: To extend the coverage of phenotypes in SNOMED CT through post-coordination. Methods: We identify frequent modifiers in terms from the Human Phenotype Ontology (HPO), which we associate with templates for post-coordinated expressions in SNOMED CT. Results: We identified 176 modifiers, created 12 templates, and generated 1,617 post-coordinated expressions. Conclusions: Through this novel approach, we can increase the current number of mappings by 50%.

Original languageEnglish (US)
Title of host publicationMEDINFO 2015
Subtitle of host publicationeHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics
PublisherIOS Press
Pages795-799
Number of pages5
ISBN (Electronic)9781614995630
DOIs
StatePublished - Jan 1 2015
Externally publishedYes
Event15th World Congress on Health and Biomedical Informatics, MEDINFO 2015 - Sao Paulo, Brazil
Duration: Aug 19 2015Aug 23 2015

Publication series

NameStudies in Health Technology and Informatics
Volume216
ISSN (Print)0926-9630
ISSN (Electronic)1879-8365

Other

Other15th World Congress on Health and Biomedical Informatics, MEDINFO 2015
CountryBrazil
CitySao Paulo
Period8/19/158/23/15

Fingerprint

Systematized Nomenclature of Medicine
Ontology
Phenotype

Keywords

  • ontology
  • phenotype
  • post coordination
  • SNOMED CT

ASJC Scopus subject areas

  • Biomedical Engineering
  • Health Informatics
  • Health Information Management

Cite this

Dhombres, F., Winnenburg, R., Case, J., & Bodenreider, O. (2015). Extending the coverage of phenotypes in SNOMED CT through post-coordination. In MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics (pp. 795-799). (Studies in Health Technology and Informatics; Vol. 216). IOS Press. https://doi.org/10.3233/978-1-61499-564-7-795

Extending the coverage of phenotypes in SNOMED CT through post-coordination. / Dhombres, Ferdinand; Winnenburg, Rainer; Case, James; Bodenreider, Olivier.

MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics. IOS Press, 2015. p. 795-799 (Studies in Health Technology and Informatics; Vol. 216).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Dhombres, F, Winnenburg, R, Case, J & Bodenreider, O 2015, Extending the coverage of phenotypes in SNOMED CT through post-coordination. in MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics. Studies in Health Technology and Informatics, vol. 216, IOS Press, pp. 795-799, 15th World Congress on Health and Biomedical Informatics, MEDINFO 2015, Sao Paulo, Brazil, 8/19/15. https://doi.org/10.3233/978-1-61499-564-7-795
Dhombres F, Winnenburg R, Case J, Bodenreider O. Extending the coverage of phenotypes in SNOMED CT through post-coordination. In MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics. IOS Press. 2015. p. 795-799. (Studies in Health Technology and Informatics). https://doi.org/10.3233/978-1-61499-564-7-795
Dhombres, Ferdinand ; Winnenburg, Rainer ; Case, James ; Bodenreider, Olivier. / Extending the coverage of phenotypes in SNOMED CT through post-coordination. MEDINFO 2015: eHealth-Enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics. IOS Press, 2015. pp. 795-799 (Studies in Health Technology and Informatics).
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