Direct detection and kinetic analysis of covalent intermediate formation in the 4-amino-4-deoxychorismate synthase catalyzed reaction

Ze He, Michael D. Toney

Research output: Contribution to journalArticle

18 Citations (Scopus)

Abstract

Chorismate-utilizing enzymes catalyze diverse reactions, providing critical physiological functions unique to plants, bacteria, fungi, and some parasites. Their absence in animals makes them excellent targets for antimicrobials and herbicides. 4-Amino-4-deoxychorismate synthase (ADCS) catalyzes the first step in folate biosynthsis and shares a common core mechanism with isochorismate synthase (IS) and anthranilate synthase (AS), in which nucleophile addition at C2 initiates these reactions. Evidence was presented previously [He, Z., Stigers Lavoie, K. D., Bartlett, P. A., and Toney, M. D. (2004) J. Am. Chem. Soc. 126, 2378-2385] that K274 is the nucleophile in ADCS, implying formation of a covalent intermediate. Herein, we report the direct detection of this covalent intermediate formed in ADCS-catalyzed reactions by ESI-MS. Difference spectra show the covalent intermediate has an absorption maximum at 310 nm. This was used to study the pre-steady-state kinetics of covalent intermediate formation under various conditions. Additionally, E258 in ADCS was shown to be critical to formation of the covalent intermediate by acting as a general acid catalyst for loss of the C4 hydroxyl group. The E258A/D mutants both exhibit very low activity. Acetate is a poor chemical rescue agent for E258D but an excellent one for E258A, with a 20000-fold and 3000-fold rate increase for Gln-dependent and NH4+-dependent activities, respectively. Lastly, A213 in IS (structurally homologous to K274 in ADCS) was changed to lysine in an attempt to convert IS to an ADCS-like enzyme. HPLC studies support the formation of a covalent intermediate with this mutant.

Original languageEnglish (US)
Pages (from-to)5019-5028
Number of pages10
JournalBiochemistry
Volume45
Issue number15
DOIs
StatePublished - Apr 18 2006

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Kinetics
Nucleophiles
Anthranilate Synthase
Herbicides
Enzymes
Fungi
Folic Acid
Hydroxyl Radical
Lysine
aminodeoxychorismate synthase
Bacteria
Parasites
Animals
Acetates
High Pressure Liquid Chromatography
Catalysts
Acids
isochorismate synthase

ASJC Scopus subject areas

  • Biochemistry

Cite this

Direct detection and kinetic analysis of covalent intermediate formation in the 4-amino-4-deoxychorismate synthase catalyzed reaction. / He, Ze; Toney, Michael D.

In: Biochemistry, Vol. 45, No. 15, 18.04.2006, p. 5019-5028.

Research output: Contribution to journalArticle

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