Complete genome sequence of Weeksella virosa type strain (9751 T)

Elke Lang, Hazuki Teshima, Susan Lucas, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Matt Nolan, Jan Fang Cheng, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Mikhailova, Natalia Ivanova, Konstantinos Mavromatis, Amrita Pati, Roxane Tapia, Cliff Han, Lynne Goodwin, Amy Chen, Krishna PalaniappanMiriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Evelyne Marie Brambilla, Markus Kopitz, Manfred Rohde, Markus Göker, Brian J. Tindall, John C. Detter, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Hans Peter Klenk, Nikos C. Kyrpides

Research output: Contribution to journalArticle

6 Scopus citations

Abstract

Weeksella virosa Holmes et al. 1987 is the sole member and type species of the genus Week-sella which belongs to the family Flavobacteriaceae of the phylum Bacteroidetes. Twenty-nine isolates, collected from clinical specimens provided the basis for the taxon description. While the species seems to be a saprophyte of the mucous membranes of healthy man and warm-blooded animals a causal relationship with disease has been reported in a few in-stances. Except for the ability to produce indole and to hydrolyze Tween and proteins such as casein and gelatin, this aerobic, non-motile, non-pigmented bacterial species is metabolically inert in most traditional biochemical tests. The 2,272,954 bp long genome with its 2,105 protein-coding and 76 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)81-90
Number of pages10
JournalStandards in Genomic Sciences
Volume4
Issue number1
DOIs
StatePublished - 2011

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Keywords

  • Flavobacteriaceae
  • GEBA
  • Gram-negative
  • Inhabitant of mucosa
  • Lyses proteins
  • Slimy
  • Strictly aerobic

ASJC Scopus subject areas

  • Genetics

Cite this

Lang, E., Teshima, H., Lucas, S., Lapidus, A., Hammon, N., Deshpande, S., Nolan, M., Cheng, J. F., Pitluck, S., Liolios, K., Pagani, I., Mikhailova, N., Ivanova, N., Mavromatis, K., Pati, A., Tapia, R., Han, C., Goodwin, L., Chen, A., ... Kyrpides, N. C. (2011). Complete genome sequence of Weeksella virosa type strain (9751 T). Standards in Genomic Sciences, 4(1), 81-90. https://doi.org/10.4056/sigs.1603927