Complete genome sequence of Veillonella parvula type strain (Te3 T)

Sabine Gronow, Sabine Welnitz, Alla Lapidus, Matt Nolan, Natalia Ivanova, Tijana Glavina del Rio, Alex Copeland, Feng Chen, Hope Tice, Sam Pitluck, Jan Fang Cheng, Elizabeth Saunders, Thomas Brettin, Cliff Han, John C. Detter, David Bruce, Lynne Goodwin, Miriam Land, Loren Hauser, Yun Juan ChangCynthia D. Jeffries, Amrita Pati, Konstantinos Mavromatis, Natalia Mikhailova, Amy Chen, Krishna Palaniappan, Patrick Chain, Manfred Rohde, Markus Göker, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, Susan Lucas

Research output: Contribution to journalArticle

19 Citations (Scopus)

Abstract

Veillonella parvula (Veillon and Zuber 1898) Prévot 1933 is the type species of the genus Veillonella in the family Veillonellaceae within the order Clostridiales. The species V. parvula is of interest because it is frequently isolated from dental plaque in the human oral cavity and can cause opportunistic infections. The species is strictly anaerobic and grows as small cocci which usually occur in pairs. Veillonellae are characterized by their unusual metabolism which is centered on the activity of the enzyme methylmalonyl-CoA decarboxylase. Strain Te3 T, the type strain of the species, was isolated from the human intestinal tract. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the large clostridial family Veillonellaceae, and the 2,132,142 bp long single replicon genome with its 1,859 protein-coding and 61 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)57-65
Number of pages9
JournalStandards in Genomic Sciences
Volume2
Issue number1
DOIs
StatePublished - 2010

Fingerprint

Veillonella
Veillonellaceae
Genome
Methylmalonyl-CoA Decarboxylase
Encyclopedias
Dental Plaque
Replicon
Archaea
Opportunistic Infections
Mouth
RNA
Bacteria
Enzymes
Genes
Proteins

Keywords

  • Dental plaque
  • Human oral microflora
  • Intergeneric coaggregation
  • Methylmalonyl-CoA decarboxylase
  • Opportunistic infections
  • Veillonellaceae

ASJC Scopus subject areas

  • Genetics

Cite this

Gronow, S., Welnitz, S., Lapidus, A., Nolan, M., Ivanova, N., del Rio, T. G., ... Lucas, S. (2010). Complete genome sequence of Veillonella parvula type strain (Te3 T). Standards in Genomic Sciences, 2(1), 57-65. https://doi.org/10.4056/sigs.521107

Complete genome sequence of Veillonella parvula type strain (Te3 T). / Gronow, Sabine; Welnitz, Sabine; Lapidus, Alla; Nolan, Matt; Ivanova, Natalia; del Rio, Tijana Glavina; Copeland, Alex; Chen, Feng; Tice, Hope; Pitluck, Sam; Cheng, Jan Fang; Saunders, Elizabeth; Brettin, Thomas; Han, Cliff; Detter, John C.; Bruce, David; Goodwin, Lynne; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Pati, Amrita; Mavromatis, Konstantinos; Mikhailova, Natalia; Chen, Amy; Palaniappan, Krishna; Chain, Patrick; Rohde, Manfred; Göker, Markus; Bristow, Jim; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Lucas, Susan.

In: Standards in Genomic Sciences, Vol. 2, No. 1, 2010, p. 57-65.

Research output: Contribution to journalArticle

Gronow, S, Welnitz, S, Lapidus, A, Nolan, M, Ivanova, N, del Rio, TG, Copeland, A, Chen, F, Tice, H, Pitluck, S, Cheng, JF, Saunders, E, Brettin, T, Han, C, Detter, JC, Bruce, D, Goodwin, L, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Pati, A, Mavromatis, K, Mikhailova, N, Chen, A, Palaniappan, K, Chain, P, Rohde, M, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Lucas, S 2010, 'Complete genome sequence of Veillonella parvula type strain (Te3 T)', Standards in Genomic Sciences, vol. 2, no. 1, pp. 57-65. https://doi.org/10.4056/sigs.521107
Gronow S, Welnitz S, Lapidus A, Nolan M, Ivanova N, del Rio TG et al. Complete genome sequence of Veillonella parvula type strain (Te3 T). Standards in Genomic Sciences. 2010;2(1):57-65. https://doi.org/10.4056/sigs.521107
Gronow, Sabine ; Welnitz, Sabine ; Lapidus, Alla ; Nolan, Matt ; Ivanova, Natalia ; del Rio, Tijana Glavina ; Copeland, Alex ; Chen, Feng ; Tice, Hope ; Pitluck, Sam ; Cheng, Jan Fang ; Saunders, Elizabeth ; Brettin, Thomas ; Han, Cliff ; Detter, John C. ; Bruce, David ; Goodwin, Lynne ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Pati, Amrita ; Mavromatis, Konstantinos ; Mikhailova, Natalia ; Chen, Amy ; Palaniappan, Krishna ; Chain, Patrick ; Rohde, Manfred ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Lucas, Susan. / Complete genome sequence of Veillonella parvula type strain (Te3 T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 1. pp. 57-65.
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AU - Saunders, Elizabeth

AU - Brettin, Thomas

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AU - Lucas, Susan

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