Abstract
Tsukamurella paurometabola corrig. (Steinhaus 1941) Collins et al. 1988 is the type species of the genus Tsukamurella, which is the type genus to the family Tsukamurellaceae. The species is not only of interest because of its isolated phylogenetic location, but also because it is a human opportunistic pathogen with some strains of the species reported to cause lung infection, lethal meningitis, and necrotizing tenosynovitis. This is the first completed genome sequence of a member of the genus Tsukamurella and the first genome sequence of a member of the family Tsukamurellaceae. The 4,479,724 bp long genome contains a 99,806 bp long plasmid and a total of 4,335 protein-coding and 56 RNA genes, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
| Original language | English (US) |
|---|---|
| Pages (from-to) | 342-351 |
| Number of pages | 10 |
| Journal | Standards in Genomic Sciences |
| Volume | 4 |
| Issue number | 3 |
| DOIs | |
| State | Published - 2011 |
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Keywords
- Chemoorganotrophic
- GEBA
- Gram-positive
- Mesophilic
- Metachromatic granules
- Non-motile
- Obligately aerobic
- Opportunistic pathogen
- Tsukamurellaceae
ASJC Scopus subject areas
- Genetics
Cite this
Complete genome sequence of Tsukamurella paurometabola type strain (no. 33 T). / Christine Munk, A.; Lapidus, Alla; Lucas, Susan; Nolan, Matt; Tice, Hope; Cheng, Jan Fang; del Rio, Tijana Glavina; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Huntemann, Marcel; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Tapia, Roxanne; Han, Cliff; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Brettin, Thomas; Yasawong, Montri; Brambilla, Evelyne Marie; Rohde, Manfred; Sikorski, Johannes; Göker, Markus; Detter, John C.; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.
In: Standards in Genomic Sciences, Vol. 4, No. 3, 2011, p. 342-351.Research output: Contribution to journal › Article
}
TY - JOUR
T1 - Complete genome sequence of Tsukamurella paurometabola type strain (no. 33 T)
AU - Christine Munk, A.
AU - Lapidus, Alla
AU - Lucas, Susan
AU - Nolan, Matt
AU - Tice, Hope
AU - Cheng, Jan Fang
AU - del Rio, Tijana Glavina
AU - Goodwin, Lynne
AU - Pitluck, Sam
AU - Liolios, Konstantinos
AU - Huntemann, Marcel
AU - Ivanova, Natalia
AU - Mavromatis, Konstantinos
AU - Mikhailova, Natalia
AU - Pati, Amrita
AU - Chen, Amy
AU - Palaniappan, Krishna
AU - Tapia, Roxanne
AU - Han, Cliff
AU - Land, Miriam
AU - Hauser, Loren
AU - Chang, Yun Juan
AU - Jeffries, Cynthia D.
AU - Brettin, Thomas
AU - Yasawong, Montri
AU - Brambilla, Evelyne Marie
AU - Rohde, Manfred
AU - Sikorski, Johannes
AU - Göker, Markus
AU - Detter, John C.
AU - Woyke, Tanja
AU - Bristow, James
AU - Eisen, Jonathan A
AU - Markowitz, Victor
AU - Hugenholtz, Philip
AU - Kyrpides, Nikos C.
AU - Klenk, Hans Peter
PY - 2011
Y1 - 2011
N2 - Tsukamurella paurometabola corrig. (Steinhaus 1941) Collins et al. 1988 is the type species of the genus Tsukamurella, which is the type genus to the family Tsukamurellaceae. The species is not only of interest because of its isolated phylogenetic location, but also because it is a human opportunistic pathogen with some strains of the species reported to cause lung infection, lethal meningitis, and necrotizing tenosynovitis. This is the first completed genome sequence of a member of the genus Tsukamurella and the first genome sequence of a member of the family Tsukamurellaceae. The 4,479,724 bp long genome contains a 99,806 bp long plasmid and a total of 4,335 protein-coding and 56 RNA genes, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
AB - Tsukamurella paurometabola corrig. (Steinhaus 1941) Collins et al. 1988 is the type species of the genus Tsukamurella, which is the type genus to the family Tsukamurellaceae. The species is not only of interest because of its isolated phylogenetic location, but also because it is a human opportunistic pathogen with some strains of the species reported to cause lung infection, lethal meningitis, and necrotizing tenosynovitis. This is the first completed genome sequence of a member of the genus Tsukamurella and the first genome sequence of a member of the family Tsukamurellaceae. The 4,479,724 bp long genome contains a 99,806 bp long plasmid and a total of 4,335 protein-coding and 56 RNA genes, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
KW - Chemoorganotrophic
KW - GEBA
KW - Gram-positive
KW - Mesophilic
KW - Metachromatic granules
KW - Non-motile
KW - Obligately aerobic
KW - Opportunistic pathogen
KW - Tsukamurellaceae
UR - http://www.scopus.com/inward/record.url?scp=80053345118&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=80053345118&partnerID=8YFLogxK
U2 - 10.4056/sigs.1894556
DO - 10.4056/sigs.1894556
M3 - Article
C2 - 21886861
AN - SCOPUS:80053345118
VL - 4
SP - 342
EP - 351
JO - Environmental Microbiomes
JF - Environmental Microbiomes
SN - 1944-3277
IS - 3
ER -