Complete genome sequence of Truepera radiovictrix type strain (RQ-24 T)

Natalia Ivanova, Christine Rohde, Christine Munk, Matt Nolan, Susan Lucas, Tijana Glavina del Rio, Hope Tice, Shweta Deshpande, Jan Fang Cheng, Roxane Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam LandLoren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Evelyne Brambilla, Manfred Rohde, Markus Göker, Brian J. Tindall, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, Alla Lapidus

Research output: Contribution to journalArticle

28 Citations (Scopus)

Abstract

Truepera radiovictrix Albuquerque et al. 2005 is the type species of the genus Truepera with-in the phylum "Deinococcus/Thermus". T. radiovictrix is of special interest not only because of its isolated phylogenetic location in the order Deinococcales, but also because of its ability to grow under multiple extreme conditions in alkaline, moderately saline, and high tempera-ture habitats. Of particular interest is the fact that, T. radiovictrix is also remarkably resistant to ionizing radiation, a feature it shares with members of the genus Deinococcus. This is the first completed genome sequence of a member of the family Trueperaceae and the fourth type strain genome sequence from a member of the order Deinococcales. The 3,260,398 bp long genome with its 2,994 protein-coding and 52 RNA genes consists of one circular chro-mosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)91-96
Number of pages6
JournalStandards in Genomic Sciences
Volume4
Issue number1
DOIs
StatePublished - 2011

Fingerprint

Deinococcus
Genome
Thermus
Encyclopedias
Aptitude
Archaea
Ionizing Radiation
Ecosystem
RNA
Bacteria
Genes
Proteins

Keywords

  • Aerobic
  • Alkaliphilic
  • Chemoorganotrophic
  • Facultatively halophilic
  • GEBA
  • Gram-indeterminate
  • Non-motile
  • Radiation resistant
  • Spherical-shaped
  • Thermophilic
  • Trueperaceae

ASJC Scopus subject areas

  • Genetics

Cite this

Ivanova, N., Rohde, C., Munk, C., Nolan, M., Lucas, S., del Rio, T. G., ... Lapidus, A. (2011). Complete genome sequence of Truepera radiovictrix type strain (RQ-24 T). Standards in Genomic Sciences, 4(1), 91-96. https://doi.org/10.4056/sigs.1563919

Complete genome sequence of Truepera radiovictrix type strain (RQ-24 T). / Ivanova, Natalia; Rohde, Christine; Munk, Christine; Nolan, Matt; Lucas, Susan; del Rio, Tijana Glavina; Tice, Hope; Deshpande, Shweta; Cheng, Jan Fang; Tapia, Roxane; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Mavromatis, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Brambilla, Evelyne; Rohde, Manfred; Göker, Markus; Tindall, Brian J.; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Lapidus, Alla.

In: Standards in Genomic Sciences, Vol. 4, No. 1, 2011, p. 91-96.

Research output: Contribution to journalArticle

Ivanova, N, Rohde, C, Munk, C, Nolan, M, Lucas, S, del Rio, TG, Tice, H, Deshpande, S, Cheng, JF, Tapia, R, Han, C, Goodwin, L, Pitluck, S, Liolios, K, Mavromatis, K, Mikhailova, N, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Brambilla, E, Rohde, M, Göker, M, Tindall, BJ, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Lapidus, A 2011, 'Complete genome sequence of Truepera radiovictrix type strain (RQ-24 T)', Standards in Genomic Sciences, vol. 4, no. 1, pp. 91-96. https://doi.org/10.4056/sigs.1563919
Ivanova, Natalia ; Rohde, Christine ; Munk, Christine ; Nolan, Matt ; Lucas, Susan ; del Rio, Tijana Glavina ; Tice, Hope ; Deshpande, Shweta ; Cheng, Jan Fang ; Tapia, Roxane ; Han, Cliff ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Mavromatis, Konstantinos ; Mikhailova, Natalia ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Brambilla, Evelyne ; Rohde, Manfred ; Göker, Markus ; Tindall, Brian J. ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Lapidus, Alla. / Complete genome sequence of Truepera radiovictrix type strain (RQ-24 T). In: Standards in Genomic Sciences. 2011 ; Vol. 4, No. 1. pp. 91-96.
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AU - Tice, Hope

AU - Deshpande, Shweta

AU - Cheng, Jan Fang

AU - Tapia, Roxane

AU - Han, Cliff

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Liolios, Konstantinos

AU - Mavromatis, Konstantinos

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AU - Palaniappan, Krishna

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AU - Woyke, Tanja

AU - Bristow, James

AU - Eisen, Jonathan A

AU - Markowitz, Victor

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AU - Lapidus, Alla

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