Complete genome sequence of Thermosphaera aggregans type strain (M11TL T)

Stefan Spring, Reinhard Rachel, Alla Lapidus, Karen Davenport, Hope Tice, Alex Copeland, Jan Fang Cheng, Susan Lucas, Feng Chen, Matt Nolan, David Bruce, Lynne Goodwin, Sam Pitluck, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati, Amy Chen, Krishna Palaniappan, L. MiriamLoren Hauser, Yun Juan Chang, Cynthia C. Jeffries, Thomas Brettin, John C. Detter, Roxanne Tapia, Cliff Han, Thomas Heimerl, Fabian Weikl, Evelyne Brambilla, Markus Göker, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

11 Citations (Scopus)

Abstract

Thermosphaera aggregans Huber et al. 1998 is the type species of the genus Thermosphaera, which comprises at the time of writing only one species. This species represents archaea with a hyperthermophilic, heterotrophic, strictly anaerobic and fermentative phenotype. The type strain M11TLT was isolated from a water-sediment sample of a hot terrestrial spring (Obsidian Pool, Yellowstone National Park, Wyoming). Here we describe the features of this organism, together with the complete genome sequence and annotation. The 1,316,595 bp long single replicon genome with its 1,410 protein-coding and 47 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)245-259
Number of pages15
JournalStandards in Genomic Sciences
Volume2
Issue number3
DOIs
StatePublished - 2010

Fingerprint

Desulfurococcaceae
Archaea
Genome
Encyclopedias
Hot Springs
Replicon
RNA
Bacteria
Phenotype
Water
Genes
Proteins

Keywords

  • Crenarchaeota
  • Desulfurococcaceae
  • GEBA
  • Hot solfataric spring
  • Hyperthermophile
  • Obligate anaerobic
  • Strictly fermentative metabolism
  • Sulfur reduction

ASJC Scopus subject areas

  • Genetics

Cite this

Spring, S., Rachel, R., Lapidus, A., Davenport, K., Tice, H., Copeland, A., ... Klenk, H. P. (2010). Complete genome sequence of Thermosphaera aggregans type strain (M11TL T). Standards in Genomic Sciences, 2(3), 245-259. https://doi.org/10.4056/sigs.821804

Complete genome sequence of Thermosphaera aggregans type strain (M11TL T). / Spring, Stefan; Rachel, Reinhard; Lapidus, Alla; Davenport, Karen; Tice, Hope; Copeland, Alex; Cheng, Jan Fang; Lucas, Susan; Chen, Feng; Nolan, Matt; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Ivanova, Natalia; Mavromatis, Konstantinos; Ovchinnikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Miriam, L.; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia C.; Brettin, Thomas; Detter, John C.; Tapia, Roxanne; Han, Cliff; Heimerl, Thomas; Weikl, Fabian; Brambilla, Evelyne; Göker, Markus; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 2, No. 3, 2010, p. 245-259.

Research output: Contribution to journalArticle

Spring, S, Rachel, R, Lapidus, A, Davenport, K, Tice, H, Copeland, A, Cheng, JF, Lucas, S, Chen, F, Nolan, M, Bruce, D, Goodwin, L, Pitluck, S, Ivanova, N, Mavromatis, K, Ovchinnikova, G, Pati, A, Chen, A, Palaniappan, K, Miriam, L, Hauser, L, Chang, YJ, Jeffries, CC, Brettin, T, Detter, JC, Tapia, R, Han, C, Heimerl, T, Weikl, F, Brambilla, E, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2010, 'Complete genome sequence of Thermosphaera aggregans type strain (M11TL T)', Standards in Genomic Sciences, vol. 2, no. 3, pp. 245-259. https://doi.org/10.4056/sigs.821804
Spring S, Rachel R, Lapidus A, Davenport K, Tice H, Copeland A et al. Complete genome sequence of Thermosphaera aggregans type strain (M11TL T). Standards in Genomic Sciences. 2010;2(3):245-259. https://doi.org/10.4056/sigs.821804
Spring, Stefan ; Rachel, Reinhard ; Lapidus, Alla ; Davenport, Karen ; Tice, Hope ; Copeland, Alex ; Cheng, Jan Fang ; Lucas, Susan ; Chen, Feng ; Nolan, Matt ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Ovchinnikova, Galina ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Miriam, L. ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia C. ; Brettin, Thomas ; Detter, John C. ; Tapia, Roxanne ; Han, Cliff ; Heimerl, Thomas ; Weikl, Fabian ; Brambilla, Evelyne ; Göker, Markus ; Bristow, James ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of Thermosphaera aggregans type strain (M11TL T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 3. pp. 245-259.
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