Complete genome sequence of Thermocrinis albus type strain (HI 11/12 T)

Reinhard Wirth, Johannes Sikorski, Evelyne Brambilla, Monica Misra, Alla Lapidus, Alex Copeland, Matt Nolan, Susan Lucas, Feng Chen, Hope Tice, Jan Fang Cheng, Cliff Han, John C. Detter, Roxane Tapia, David Bruce, Lynne Goodwin, Sam Pitluck, Amrita Pati, Iain Anderson, Natalia IvanovaKonstantinos Mavromatis, Natalia Mikhailova, Amy Chen, Krishna Palaniappan, Yvonne Bilek, Thomas Hader, Miriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Brian J. Tindall, Manfred Rohde, Markus Göker, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

7 Citations (Scopus)

Abstract

Thermocrinis albus Eder and Huber 2002 is one of three species in the genus Thermocrinis in the family Aquificaceae. Members of this family have become of significant interest because of their involvement in global biogeochemical cycles in high-temperature ecosystems. This interest had already spurred several genome sequencing projects for members of the family. We here report the first completed genome sequence a member of the genus Thermocrinis and the first type strain genome from a member of the family Aquificaceae. The 1,500,577 bp long genome with its 1,603 protein-coding and 47 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)194-202
Number of pages9
JournalStandards in Genomic Sciences
Volume2
Issue number2
DOIs
StatePublished - 2010

Fingerprint

Genome
Encyclopedias
Archaea
Ecosystem
RNA
Bacteria
Temperature
Genes
Proteins

Keywords

  • (hyper-)thermophile
  • Aquificaceae
  • Biogeochemistry
  • Chemolithoautotrophic
  • Flagellated
  • GEBA
  • Gram-negative
  • Microaerophilic
  • Non-pathogen
  • Non-sporeforming

ASJC Scopus subject areas

  • Genetics

Cite this

Wirth, R., Sikorski, J., Brambilla, E., Misra, M., Lapidus, A., Copeland, A., ... Klenk, H. P. (2010). Complete genome sequence of Thermocrinis albus type strain (HI 11/12 T). Standards in Genomic Sciences, 2(2), 194-202. https://doi.org/10.4056/sigs.761490

Complete genome sequence of Thermocrinis albus type strain (HI 11/12 T). / Wirth, Reinhard; Sikorski, Johannes; Brambilla, Evelyne; Misra, Monica; Lapidus, Alla; Copeland, Alex; Nolan, Matt; Lucas, Susan; Chen, Feng; Tice, Hope; Cheng, Jan Fang; Han, Cliff; Detter, John C.; Tapia, Roxane; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Pati, Amrita; Anderson, Iain; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Chen, Amy; Palaniappan, Krishna; Bilek, Yvonne; Hader, Thomas; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Tindall, Brian J.; Rohde, Manfred; Göker, Markus; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 2, No. 2, 2010, p. 194-202.

Research output: Contribution to journalArticle

Wirth, R, Sikorski, J, Brambilla, E, Misra, M, Lapidus, A, Copeland, A, Nolan, M, Lucas, S, Chen, F, Tice, H, Cheng, JF, Han, C, Detter, JC, Tapia, R, Bruce, D, Goodwin, L, Pitluck, S, Pati, A, Anderson, I, Ivanova, N, Mavromatis, K, Mikhailova, N, Chen, A, Palaniappan, K, Bilek, Y, Hader, T, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Tindall, BJ, Rohde, M, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2010, 'Complete genome sequence of Thermocrinis albus type strain (HI 11/12 T)', Standards in Genomic Sciences, vol. 2, no. 2, pp. 194-202. https://doi.org/10.4056/sigs.761490
Wirth R, Sikorski J, Brambilla E, Misra M, Lapidus A, Copeland A et al. Complete genome sequence of Thermocrinis albus type strain (HI 11/12 T). Standards in Genomic Sciences. 2010;2(2):194-202. https://doi.org/10.4056/sigs.761490
Wirth, Reinhard ; Sikorski, Johannes ; Brambilla, Evelyne ; Misra, Monica ; Lapidus, Alla ; Copeland, Alex ; Nolan, Matt ; Lucas, Susan ; Chen, Feng ; Tice, Hope ; Cheng, Jan Fang ; Han, Cliff ; Detter, John C. ; Tapia, Roxane ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Pati, Amrita ; Anderson, Iain ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Mikhailova, Natalia ; Chen, Amy ; Palaniappan, Krishna ; Bilek, Yvonne ; Hader, Thomas ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Tindall, Brian J. ; Rohde, Manfred ; Göker, Markus ; Bristow, James ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of Thermocrinis albus type strain (HI 11/12 T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 2. pp. 194-202.
@article{6617a748f5d44fc297162c36ddf90035,
title = "Complete genome sequence of Thermocrinis albus type strain (HI 11/12 T)",
abstract = "Thermocrinis albus Eder and Huber 2002 is one of three species in the genus Thermocrinis in the family Aquificaceae. Members of this family have become of significant interest because of their involvement in global biogeochemical cycles in high-temperature ecosystems. This interest had already spurred several genome sequencing projects for members of the family. We here report the first completed genome sequence a member of the genus Thermocrinis and the first type strain genome from a member of the family Aquificaceae. The 1,500,577 bp long genome with its 1,603 protein-coding and 47 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.",
keywords = "(hyper-)thermophile, Aquificaceae, Biogeochemistry, Chemolithoautotrophic, Flagellated, GEBA, Gram-negative, Microaerophilic, Non-pathogen, Non-sporeforming",
author = "Reinhard Wirth and Johannes Sikorski and Evelyne Brambilla and Monica Misra and Alla Lapidus and Alex Copeland and Matt Nolan and Susan Lucas and Feng Chen and Hope Tice and Cheng, {Jan Fang} and Cliff Han and Detter, {John C.} and Roxane Tapia and David Bruce and Lynne Goodwin and Sam Pitluck and Amrita Pati and Iain Anderson and Natalia Ivanova and Konstantinos Mavromatis and Natalia Mikhailova and Amy Chen and Krishna Palaniappan and Yvonne Bilek and Thomas Hader and Miriam Land and Loren Hauser and Chang, {Yun Juan} and Jeffries, {Cynthia D.} and Tindall, {Brian J.} and Manfred Rohde and Markus G{\"o}ker and James Bristow and Eisen, {Jonathan A} and Victor Markowitz and Philip Hugenholtz and Kyrpides, {Nikos C.} and Klenk, {Hans Peter}",
year = "2010",
doi = "10.4056/sigs.761490",
language = "English (US)",
volume = "2",
pages = "194--202",
journal = "Environmental Microbiomes",
issn = "1944-3277",
publisher = "BioMed Central Ltd.",
number = "2",

}

TY - JOUR

T1 - Complete genome sequence of Thermocrinis albus type strain (HI 11/12 T)

AU - Wirth, Reinhard

AU - Sikorski, Johannes

AU - Brambilla, Evelyne

AU - Misra, Monica

AU - Lapidus, Alla

AU - Copeland, Alex

AU - Nolan, Matt

AU - Lucas, Susan

AU - Chen, Feng

AU - Tice, Hope

AU - Cheng, Jan Fang

AU - Han, Cliff

AU - Detter, John C.

AU - Tapia, Roxane

AU - Bruce, David

AU - Goodwin, Lynne

AU - Pitluck, Sam

AU - Pati, Amrita

AU - Anderson, Iain

AU - Ivanova, Natalia

AU - Mavromatis, Konstantinos

AU - Mikhailova, Natalia

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Bilek, Yvonne

AU - Hader, Thomas

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Tindall, Brian J.

AU - Rohde, Manfred

AU - Göker, Markus

AU - Bristow, James

AU - Eisen, Jonathan A

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

PY - 2010

Y1 - 2010

N2 - Thermocrinis albus Eder and Huber 2002 is one of three species in the genus Thermocrinis in the family Aquificaceae. Members of this family have become of significant interest because of their involvement in global biogeochemical cycles in high-temperature ecosystems. This interest had already spurred several genome sequencing projects for members of the family. We here report the first completed genome sequence a member of the genus Thermocrinis and the first type strain genome from a member of the family Aquificaceae. The 1,500,577 bp long genome with its 1,603 protein-coding and 47 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

AB - Thermocrinis albus Eder and Huber 2002 is one of three species in the genus Thermocrinis in the family Aquificaceae. Members of this family have become of significant interest because of their involvement in global biogeochemical cycles in high-temperature ecosystems. This interest had already spurred several genome sequencing projects for members of the family. We here report the first completed genome sequence a member of the genus Thermocrinis and the first type strain genome from a member of the family Aquificaceae. The 1,500,577 bp long genome with its 1,603 protein-coding and 47 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

KW - (hyper-)thermophile

KW - Aquificaceae

KW - Biogeochemistry

KW - Chemolithoautotrophic

KW - Flagellated

KW - GEBA

KW - Gram-negative

KW - Microaerophilic

KW - Non-pathogen

KW - Non-sporeforming

UR - http://www.scopus.com/inward/record.url?scp=84857074910&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=84857074910&partnerID=8YFLogxK

U2 - 10.4056/sigs.761490

DO - 10.4056/sigs.761490

M3 - Article

C2 - 21304702

AN - SCOPUS:84857074910

VL - 2

SP - 194

EP - 202

JO - Environmental Microbiomes

JF - Environmental Microbiomes

SN - 1944-3277

IS - 2

ER -