Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T)

Cliff Han, Wei Gu, Xiaojing Zhang, Alla Lapidus, Matt Nolan, Alex Copeland, Susan Lucas, Tijana Glavina del Rio, Hope Tice, Jan Fang Cheng, Roxane Tapia, Lynne Goodwin, Sam Pitluck, Ioanna Pagani, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati, Amy Chen, Krishna PalaniappanMiriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Susanne Schneider, Manfred Rohde, Markus Göker, Rüdiger Pukall, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, John C. Detter

Research output: Contribution to journalArticle

7 Citations (Scopus)

Abstract

Thermaerobacter marianensis Takai et al. 1999 is the type species of the genus Thermaerobacter, which belongs to the Clostridiales family Incertae Sedis XVII. The species is of special interest because T. marianensis is an aerobic, thermophilic marine bacterium, originally isolated from the deepest part in the western Pacific Ocean (Mariana Trench) at the depth of 10, 897 m. Interestingly, the taxonomic status of the genus has not been clarified until now. The genus Thermaerobacter may represent a very deep group within the Firmicutes or potentially a novel phylum. The 2,844,696 bp long genome with its 2,375 protein-coding and 60 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)337-345
Number of pages9
JournalStandards in Genomic Sciences
Volume3
Issue number3
DOIs
StatePublished - 2010

Fingerprint

Genome
Encyclopedias
Pacific Ocean
Bacteria
Archaea
Chromosomes
RNA
Genes
Proteins
Firmicutes
Clostridiales

Keywords

  • Chemoheterotrophic
  • Clostridiales
  • Deep-sea
  • Family incertae sedis XVII
  • GEBA
  • Gram-variable
  • None-motile
  • Strictly aerobic
  • Thermophilic

ASJC Scopus subject areas

  • Genetics

Cite this

Han, C., Gu, W., Zhang, X., Lapidus, A., Nolan, M., Copeland, A., ... Detter, J. C. (2010). Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T). Standards in Genomic Sciences, 3(3), 337-345. https://doi.org/10.4056/sigs.1373474

Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T). / Han, Cliff; Gu, Wei; Zhang, Xiaojing; Lapidus, Alla; Nolan, Matt; Copeland, Alex; Lucas, Susan; del Rio, Tijana Glavina; Tice, Hope; Cheng, Jan Fang; Tapia, Roxane; Goodwin, Lynne; Pitluck, Sam; Pagani, Ioanna; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Schneider, Susanne; Rohde, Manfred; Göker, Markus; Pukall, Rüdiger; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Detter, John C.

In: Standards in Genomic Sciences, Vol. 3, No. 3, 2010, p. 337-345.

Research output: Contribution to journalArticle

Han, C, Gu, W, Zhang, X, Lapidus, A, Nolan, M, Copeland, A, Lucas, S, del Rio, TG, Tice, H, Cheng, JF, Tapia, R, Goodwin, L, Pitluck, S, Pagani, I, Ivanova, N, Mavromatis, K, Mikhailova, N, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Schneider, S, Rohde, M, Göker, M, Pukall, R, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Detter, JC 2010, 'Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T)', Standards in Genomic Sciences, vol. 3, no. 3, pp. 337-345. https://doi.org/10.4056/sigs.1373474
Han, Cliff ; Gu, Wei ; Zhang, Xiaojing ; Lapidus, Alla ; Nolan, Matt ; Copeland, Alex ; Lucas, Susan ; del Rio, Tijana Glavina ; Tice, Hope ; Cheng, Jan Fang ; Tapia, Roxane ; Goodwin, Lynne ; Pitluck, Sam ; Pagani, Ioanna ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Mikhailova, Natalia ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Schneider, Susanne ; Rohde, Manfred ; Göker, Markus ; Pukall, Rüdiger ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Detter, John C. / Complete genome sequence of Thermaerobacter marianensis type strain (7p75a T). In: Standards in Genomic Sciences. 2010 ; Vol. 3, No. 3. pp. 337-345.
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