Complete genome sequence of the thermophilic sulfur-reducer Desulfurobacterium thermolithotrophum type strain (BSA T) from a deep-sea hydrothermal vent

Markus Göker, Hajnalka Daligault, Romano Mwirichia, Alla Lapidus, Susan Lucas, Shweta Deshpande, Ioanna Pagani, Roxanne Tapia, Jan Fang Cheng, Lynne Goodwin, Sam Pit-Luck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati, Amy Chen, Krishna Palaniappan, Cliff Han, Miriam LandLoren Hauser, Chongle Pan, Evelyne Marie Brambilla, Manfred Rohde, Stefan Spring, Johannes Sikorski, Reinhard Wirth, John C. Detter, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

9 Citations (Scopus)

Abstract

Desulfurobacterium thermolithotrophum L'Haridon et al. 1998 is the type species of the genus Desulfurobacterium which belongs to the family Desulfurobacteriaceae. The species is of interest because it represents the first thermophilic bacterium that can act as a primary producer in the temperature range of 45-75 °C (optimum 70°C) and is incapable of growing under microaerophilic conditions. Strain BSA T preferentially synthesizes high-melting-point fatty acids (C 18 and C 20) which is hypothesized to be a strategy to ensure the functionality of the membrane at high growth temperatures. This is the second completed genome sequence of a member of the family Desulfurobacteriaceae and the first sequence from the genus Desulfurobacterium. The 1,541,968 bp long genome harbors 1,543 protein-coding and 51 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)407-415
Number of pages9
JournalStandards in Genomic Sciences
Volume5
Issue number3
DOIs
StatePublished - 2011

Fingerprint

Hydrothermal Vents
Sulfur
Genome
Encyclopedias
Bacteria
Temperature
Archaea
Freezing
Fatty Acids
RNA
Membranes
Growth
Genes
Proteins

Keywords

  • Anaerobic
  • Desulfurobacteriaceae
  • GEBA
  • Gram-negative
  • Marine
  • Neutrophilic
  • Obligately chemolithoautotrophic
  • Sulfur-reducing
  • Thermophilic

ASJC Scopus subject areas

  • Genetics

Cite this

Complete genome sequence of the thermophilic sulfur-reducer Desulfurobacterium thermolithotrophum type strain (BSA T) from a deep-sea hydrothermal vent. / Göker, Markus; Daligault, Hajnalka; Mwirichia, Romano; Lapidus, Alla; Lucas, Susan; Deshpande, Shweta; Pagani, Ioanna; Tapia, Roxanne; Cheng, Jan Fang; Goodwin, Lynne; Pit-Luck, Sam; Liolios, Konstantinos; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Han, Cliff; Land, Miriam; Hauser, Loren; Pan, Chongle; Brambilla, Evelyne Marie; Rohde, Manfred; Spring, Stefan; Sikorski, Johannes; Wirth, Reinhard; Detter, John C.; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 5, No. 3, 2011, p. 407-415.

Research output: Contribution to journalArticle

Göker, M, Daligault, H, Mwirichia, R, Lapidus, A, Lucas, S, Deshpande, S, Pagani, I, Tapia, R, Cheng, JF, Goodwin, L, Pit-Luck, S, Liolios, K, Ivanova, N, Mavromatis, K, Mikhailova, N, Pati, A, Chen, A, Palaniappan, K, Han, C, Land, M, Hauser, L, Pan, C, Brambilla, EM, Rohde, M, Spring, S, Sikorski, J, Wirth, R, Detter, JC, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2011, 'Complete genome sequence of the thermophilic sulfur-reducer Desulfurobacterium thermolithotrophum type strain (BSA T) from a deep-sea hydrothermal vent', Standards in Genomic Sciences, vol. 5, no. 3, pp. 407-415. https://doi.org/10.4056/sigs.2465574
Göker, Markus ; Daligault, Hajnalka ; Mwirichia, Romano ; Lapidus, Alla ; Lucas, Susan ; Deshpande, Shweta ; Pagani, Ioanna ; Tapia, Roxanne ; Cheng, Jan Fang ; Goodwin, Lynne ; Pit-Luck, Sam ; Liolios, Konstantinos ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Mikhailova, Natalia ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Han, Cliff ; Land, Miriam ; Hauser, Loren ; Pan, Chongle ; Brambilla, Evelyne Marie ; Rohde, Manfred ; Spring, Stefan ; Sikorski, Johannes ; Wirth, Reinhard ; Detter, John C. ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of the thermophilic sulfur-reducer Desulfurobacterium thermolithotrophum type strain (BSA T) from a deep-sea hydrothermal vent. In: Standards in Genomic Sciences. 2011 ; Vol. 5, No. 3. pp. 407-415.
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AU - Daligault, Hajnalka

AU - Mwirichia, Romano

AU - Lapidus, Alla

AU - Lucas, Susan

AU - Deshpande, Shweta

AU - Pagani, Ioanna

AU - Tapia, Roxanne

AU - Cheng, Jan Fang

AU - Goodwin, Lynne

AU - Pit-Luck, Sam

AU - Liolios, Konstantinos

AU - Ivanova, Natalia

AU - Mavromatis, Konstantinos

AU - Mikhailova, Natalia

AU - Pati, Amrita

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Han, Cliff

AU - Land, Miriam

AU - Hauser, Loren

AU - Pan, Chongle

AU - Brambilla, Evelyne Marie

AU - Rohde, Manfred

AU - Spring, Stefan

AU - Sikorski, Johannes

AU - Wirth, Reinhard

AU - Detter, John C.

AU - Woyke, Tanja

AU - Bristow, James

AU - Eisen, Jonathan A

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

PY - 2011

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