Complete genome sequence of Sulfurospirillum deleyianum type strain (5175 T)

Johannes Sikorski, Alla Lapidus, Alex Copeland, Tijana Glavina Del Rio, Matt Nolan, Susan Lucas, Feng Chen, Hope Tice, Jan Fang Cheng, Elizabeth Saunders, David Bruce, Lynne Goodwin, Sam Pitluck, Galina Ovchinnikova, Amrita Pati, Natalia Ivanova, Konstantinos Mavromatis, Amy Chen, Krishna Palaniappan, Patrick ChainMiriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Thomas Brettin, John C. Detter, Cliff Han, Manfred Rohde, Elke Lang, Stefan Spring, Markus Göker, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

24 Citations (Scopus)

Abstract

Sulfurospirillum deleyianum Schumacher et al. 1993 is the type species of the genus Sulfurospirillum. S. deleyianum is a model organism for studying sulfur reduction and dissimilatory nitrate reduction as an energy source for growth. Also, it is a prominent model organism for studying the structural and functional characteristics of cytochrome c nitrite reductase. Here, we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of the genus Sulfurospirillum. The 2,306,351 bp long genome with its 2,291 protein-coding and 52 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)149-157
Number of pages9
JournalStandards in Genomic Sciences
Volume2
Issue number2
DOIs
StatePublished - 2010

Fingerprint

nitrate reductase (cytochrome)
Genome
Encyclopedias
Archaea
Sulfur
Nitrates
RNA
Bacteria
Growth
Genes
Proteins

Keywords

  • Anaerobic
  • Campylobacteraceae
  • Dissimilatory nitrate reduction
  • GEBA
  • Gramnegative
  • Microaerobic
  • Motile
  • Sulfur reduction

ASJC Scopus subject areas

  • Genetics

Cite this

Sikorski, J., Lapidus, A., Copeland, A., Glavina Del Rio, T., Nolan, M., Lucas, S., ... Klenk, H. P. (2010). Complete genome sequence of Sulfurospirillum deleyianum type strain (5175 T). Standards in Genomic Sciences, 2(2), 149-157. https://doi.org/10.4056/sigs.671209

Complete genome sequence of Sulfurospirillum deleyianum type strain (5175 T). / Sikorski, Johannes; Lapidus, Alla; Copeland, Alex; Glavina Del Rio, Tijana; Nolan, Matt; Lucas, Susan; Chen, Feng; Tice, Hope; Cheng, Jan Fang; Saunders, Elizabeth; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Ovchinnikova, Galina; Pati, Amrita; Ivanova, Natalia; Mavromatis, Konstantinos; Chen, Amy; Palaniappan, Krishna; Chain, Patrick; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Brettin, Thomas; Detter, John C.; Han, Cliff; Rohde, Manfred; Lang, Elke; Spring, Stefan; Göker, Markus; Bristow, Jim; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 2, No. 2, 2010, p. 149-157.

Research output: Contribution to journalArticle

Sikorski, J, Lapidus, A, Copeland, A, Glavina Del Rio, T, Nolan, M, Lucas, S, Chen, F, Tice, H, Cheng, JF, Saunders, E, Bruce, D, Goodwin, L, Pitluck, S, Ovchinnikova, G, Pati, A, Ivanova, N, Mavromatis, K, Chen, A, Palaniappan, K, Chain, P, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Brettin, T, Detter, JC, Han, C, Rohde, M, Lang, E, Spring, S, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2010, 'Complete genome sequence of Sulfurospirillum deleyianum type strain (5175 T)', Standards in Genomic Sciences, vol. 2, no. 2, pp. 149-157. https://doi.org/10.4056/sigs.671209
Sikorski J, Lapidus A, Copeland A, Glavina Del Rio T, Nolan M, Lucas S et al. Complete genome sequence of Sulfurospirillum deleyianum type strain (5175 T). Standards in Genomic Sciences. 2010;2(2):149-157. https://doi.org/10.4056/sigs.671209
Sikorski, Johannes ; Lapidus, Alla ; Copeland, Alex ; Glavina Del Rio, Tijana ; Nolan, Matt ; Lucas, Susan ; Chen, Feng ; Tice, Hope ; Cheng, Jan Fang ; Saunders, Elizabeth ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Ovchinnikova, Galina ; Pati, Amrita ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Chen, Amy ; Palaniappan, Krishna ; Chain, Patrick ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Brettin, Thomas ; Detter, John C. ; Han, Cliff ; Rohde, Manfred ; Lang, Elke ; Spring, Stefan ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of Sulfurospirillum deleyianum type strain (5175 T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 2. pp. 149-157.
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