Complete genome sequence of Streptosporangium roseum type strain (NI 9100 T)

Matt Nolan, Johannes Sikorski, Marlen Jando, Susan Lucas, Alla Lapidus, Tijana Glavina del Rio, Feng Chen, Hope Tice, Sam Pitluck, Jan Fang Cheng, Olga Chertkov, David Sims, Linda Meincke, Thomas Brettin, Cliff Han, John C. Detter, David Bruce, Lynne Goodwin, Miriam Land, Loren HauserYun Juan Chang, Cynthia D. Jeffries, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amy Chen, Krishna Palaniappan, Patrick Chain, Manfred Rohde, Markus Göker, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

22 Citations (Scopus)

Abstract

Streptosporangium roseum Couch 1955 is the type strain of the species which is the type species of the genus Streptosporangium. The 'pinkish coiled Streptomyces-like organism with a spore case' was isolated from vegetable garden soil in 1955. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a member of the family Streptosporangiaceae, and the second largest microbial genome sequence ever deciphered. The 10,369,518 bp long genome with its 9,421 protein-coding and 80 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)29-37
Number of pages9
JournalStandards in Genomic Sciences
Volume2
Issue number1
DOIs
StatePublished - 2010

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Genome
Microbial Genome
Encyclopedias
Archaea
Streptomyces
Spores
Vegetables
Soil
RNA
Bacteria
Genes
Proteins
Gardens

Keywords

  • Aerobic
  • GEBA
  • Gram-positive
  • Non-motile
  • Non-motile spores
  • S. claviforme
  • Sporangia
  • Streptosporangiaceae
  • Vegetative and aerial mycelia

ASJC Scopus subject areas

  • Genetics

Cite this

Nolan, M., Sikorski, J., Jando, M., Lucas, S., Lapidus, A., del Rio, T. G., ... Klenk, H. P. (2010). Complete genome sequence of Streptosporangium roseum type strain (NI 9100 T). Standards in Genomic Sciences, 2(1), 29-37. https://doi.org/10.4056/sigs.631049

Complete genome sequence of Streptosporangium roseum type strain (NI 9100 T). / Nolan, Matt; Sikorski, Johannes; Jando, Marlen; Lucas, Susan; Lapidus, Alla; del Rio, Tijana Glavina; Chen, Feng; Tice, Hope; Pitluck, Sam; Cheng, Jan Fang; Chertkov, Olga; Sims, David; Meincke, Linda; Brettin, Thomas; Han, Cliff; Detter, John C.; Bruce, David; Goodwin, Lynne; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Chen, Amy; Palaniappan, Krishna; Chain, Patrick; Rohde, Manfred; Göker, Markus; Bristow, Jim; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 2, No. 1, 2010, p. 29-37.

Research output: Contribution to journalArticle

Nolan, M, Sikorski, J, Jando, M, Lucas, S, Lapidus, A, del Rio, TG, Chen, F, Tice, H, Pitluck, S, Cheng, JF, Chertkov, O, Sims, D, Meincke, L, Brettin, T, Han, C, Detter, JC, Bruce, D, Goodwin, L, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Ivanova, N, Mavromatis, K, Mikhailova, N, Chen, A, Palaniappan, K, Chain, P, Rohde, M, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2010, 'Complete genome sequence of Streptosporangium roseum type strain (NI 9100 T)', Standards in Genomic Sciences, vol. 2, no. 1, pp. 29-37. https://doi.org/10.4056/sigs.631049
Nolan, Matt ; Sikorski, Johannes ; Jando, Marlen ; Lucas, Susan ; Lapidus, Alla ; del Rio, Tijana Glavina ; Chen, Feng ; Tice, Hope ; Pitluck, Sam ; Cheng, Jan Fang ; Chertkov, Olga ; Sims, David ; Meincke, Linda ; Brettin, Thomas ; Han, Cliff ; Detter, John C. ; Bruce, David ; Goodwin, Lynne ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Mikhailova, Natalia ; Chen, Amy ; Palaniappan, Krishna ; Chain, Patrick ; Rohde, Manfred ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of Streptosporangium roseum type strain (NI 9100 T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 1. pp. 29-37.
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