Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21 T)

Chris Munk, Alla Lapidus, Alex Copeland, Marlen Jando, Shanmugam Mayilraj, Tijana Glavina del Rio, Matt Nolan, Feng Chen, Susan Lucas, Hope Tice, Jan Fang Cheng, Cliff Han, John C. Detter, David Bruce, Lynne Goodwin, Patrick Chain, Sam Pitluck, Markus Göker, Galina Ovchinikova, Amrita PatiNatalia Ivanova, Konstantinos Mavromatis, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

15 Scopus citations

Abstract

Stackebrandtia nassauensis Labeda and Kroppenstedt (2005) is the type species of the genus Stackebrandtia, and a member of the actinobacterial family Glycomycetaceae. Stackebrandtia currently contains two species, which are differentiated from Glycomyces spp. by cellular fatty acid and menaquinone composition. Strain LLR-40K-21 T is Gram-positive, aerobic, and nonmotile, with a branched substrate mycelium and on some media an aerial mycelium. The strain was originally isolated from a soil sample collected from a road side in Nassau, Bahamas. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of the actinobacterial suborder Glycomycineae. The 6,841,557 bp long single replicon genome with its 6487 protein-coding and 53 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)292-299
Number of pages8
JournalStandards in Genomic Sciences
Volume1
Issue number3
DOIs
StatePublished - 2009

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Keywords

  • 2-hydroxy fatty acidscontaining
  • Aerobic
  • Glycomycetaceae
  • Gram-positive
  • Mycelium producing
  • Non-acid-fast

ASJC Scopus subject areas

  • Genetics

Cite this

Munk, C., Lapidus, A., Copeland, A., Jando, M., Mayilraj, S., del Rio, T. G., Nolan, M., Chen, F., Lucas, S., Tice, H., Cheng, J. F., Han, C., Detter, J. C., Bruce, D., Goodwin, L., Chain, P., Pitluck, S., Göker, M., Ovchinikova, G., ... Klenk, H. P. (2009). Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21 T). Standards in Genomic Sciences, 1(3), 292-299. https://doi.org/10.4056/sigs.47643