Complete genome sequence of Spirosoma linguale type strain (1 T)

Kathleen Lail; Johannes Sikorski; Elizabeth Saunders; Alla Lapidus; Tijana Glavina Del Rio; Alex Copeland; Hope Tice; Jan Fang Cheng; Susan Lucas; Matt Nolan; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Ivanova; Konstantinos Mavromatis; Galina Ovchinnikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun Juan Chang; Cynthia D. Jeffries; Patrick Chain; Thomas Brettin; John C. Detter; Andrea Schütze; Manfred Rohde; Brian J. Tindall; Markus Göker; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C. Kyrpides; Hans Peter Klenk; Feng Chen

doi:10.4056/sigs.741334

Complete genome sequence of Spirosoma linguale type strain (1 ^T)

Kathleen Lail, Johannes Sikorski, Elizabeth Saunders, Alla Lapidus, Tijana Glavina Del Rio, Alex Copeland, Hope Tice, Jan Fang Cheng, Susan Lucas, Matt Nolan, David Bruce, Lynne Goodwin, Sam Pitluck, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam LandLoren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Patrick Chain, Thomas Brettin, John C. Detter, Andrea Schütze, Manfred Rohde, Brian J. Tindall, Markus Göker, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, Feng Chen

Medical Microbiology and Immunology

Research output: Contribution to journal › Article › peer-review

33 Scopus citations

Abstract

Spirosoma linguale Migula 1894 is the type species of the genus. S. linguale is a free-living and non-pathogenic organism, known for its peculiar ringlike and horseshoe-shaped cell morphology. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is only the third completed genome sequence of a member of the family Cytophagaceae. The 8,491,258 bp long genome with its eight plasmids, 7,069 protein-coding and 60 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original language	English (US)
Pages (from-to)	176-185
Number of pages	10
Journal	Standards in Genomic Sciences
Volume	2
Issue number	2
DOIs	https://doi.org/10.4056/sigs.741334
State	Published - 2010

Keywords

Aerobic
Cytophagaceae
Freeliving
GEBA
Non-pathogenic
Oligotrophic
Psychroactive
Ringlike morphology

ASJC Scopus subject areas

Genetics

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10.4056/sigs.741334

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Lail, K., Sikorski, J., Saunders, E., Lapidus, A., Glavina Del Rio, T., Copeland, A., Tice, H., Cheng, J. F., Lucas, S., Nolan, M., Bruce, D., Goodwin, L., Pitluck, S., Ivanova, N., Mavromatis, K., Ovchinnikova, G., Pati, A., Chen, A., Palaniappan, K., ... Chen, F. (2010). Complete genome sequence of Spirosoma linguale type strain (1 ^T). Standards in Genomic Sciences, 2(2), 176-185. https://doi.org/10.4056/sigs.741334

Complete genome sequence of Spirosoma linguale type strain (1 ^T). / Lail, Kathleen; Sikorski, Johannes; Saunders, Elizabeth; Lapidus, Alla; Glavina Del Rio, Tijana; Copeland, Alex; Tice, Hope; Cheng, Jan Fang; Lucas, Susan; Nolan, Matt; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Ivanova, Natalia; Mavromatis, Konstantinos; Ovchinnikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Chain, Patrick; Brettin, Thomas; Detter, John C.; Schütze, Andrea; Rohde, Manfred; Tindall, Brian J.; Göker, Markus; Bristow, Jim; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Chen, Feng.

In: Standards in Genomic Sciences, Vol. 2, No. 2, 2010, p. 176-185.

Research output: Contribution to journal › Article › peer-review

Lail, K, Sikorski, J, Saunders, E, Lapidus, A, Glavina Del Rio, T, Copeland, A, Tice, H, Cheng, JF, Lucas, S, Nolan, M, Bruce, D, Goodwin, L, Pitluck, S, Ivanova, N, Mavromatis, K, Ovchinnikova, G, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Chain, P, Brettin, T, Detter, JC, Schütze, A, Rohde, M, Tindall, BJ, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Chen, F 2010, 'Complete genome sequence of Spirosoma linguale type strain (1 ^T)', Standards in Genomic Sciences, vol. 2, no. 2, pp. 176-185. https://doi.org/10.4056/sigs.741334

Lail, Kathleen ; Sikorski, Johannes ; Saunders, Elizabeth ; Lapidus, Alla ; Glavina Del Rio, Tijana ; Copeland, Alex ; Tice, Hope ; Cheng, Jan Fang ; Lucas, Susan ; Nolan, Matt ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Ovchinnikova, Galina ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Chain, Patrick ; Brettin, Thomas ; Detter, John C. ; Schütze, Andrea ; Rohde, Manfred ; Tindall, Brian J. ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Chen, Feng. / Complete genome sequence of Spirosoma linguale type strain (1 ^T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 2. pp. 176-185.

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