Complete genome sequence of Segniliparus rotundus type strain (CDC 1076 T)

Johannes Sikorski, Alla Lapidus, Alex Copeland, Monica Misra, Tijana Glavina Del Rio, Matt Nolan, Susan Lucas, Feng Chen, Hope Tice, Jan Fang Cheng, Marlen Jando, Susanne Schneider, David Bruce, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Mikhailova, Amrita Pati, Natalia Ivanova, Konstantinos MavromatisAmy Chen, Krishna Palaniappan, Olga Chertkov, Miriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Thomas Brettin, John C. Detter, Cliff Han, Manfred Rohde, Markus Göker, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

8 Citations (Scopus)

Abstract

Segniliparus rotundus Butler 2005 is the type species of the genus Segniliparus, which is currently the only genus in the corynebacterial family Segniliparaceae. This family is of large interest because of a novel late-emerging genus-specific mycolate pattern. The type strain has been isolated from human sputum and is probably an opportunistic pathogen. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of the family Segniliparaceae. The 3,157,527 bp long genome with its 3,081 protein-coding and 52 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)203-211
Number of pages9
JournalStandards in Genomic Sciences
Volume2
Issue number2
DOIs
StatePublished - 2010

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Centers for Disease Control and Prevention (U.S.)
Genome
Encyclopedias
Archaea
Sputum
RNA
Bacteria
Genes
Proteins

Keywords

  • Aerobic
  • Corynebacterineae
  • GEBA
  • Non-sporeforming
  • Novel mycolic acid
  • Opportunistic pathogen

ASJC Scopus subject areas

  • Genetics

Cite this

Sikorski, J., Lapidus, A., Copeland, A., Misra, M., Glavina Del Rio, T., Nolan, M., ... Klenk, H. P. (2010). Complete genome sequence of Segniliparus rotundus type strain (CDC 1076 T). Standards in Genomic Sciences, 2(2), 203-211. https://doi.org/10.4056/sigs.791633

Complete genome sequence of Segniliparus rotundus type strain (CDC 1076 T). / Sikorski, Johannes; Lapidus, Alla; Copeland, Alex; Misra, Monica; Glavina Del Rio, Tijana; Nolan, Matt; Lucas, Susan; Chen, Feng; Tice, Hope; Cheng, Jan Fang; Jando, Marlen; Schneider, Susanne; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Ivanova, Natalia; Mavromatis, Konstantinos; Chen, Amy; Palaniappan, Krishna; Chertkov, Olga; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Brettin, Thomas; Detter, John C.; Han, Cliff; Rohde, Manfred; Göker, Markus; Bristow, Jim; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 2, No. 2, 2010, p. 203-211.

Research output: Contribution to journalArticle

Sikorski, J, Lapidus, A, Copeland, A, Misra, M, Glavina Del Rio, T, Nolan, M, Lucas, S, Chen, F, Tice, H, Cheng, JF, Jando, M, Schneider, S, Bruce, D, Goodwin, L, Pitluck, S, Liolios, K, Mikhailova, N, Pati, A, Ivanova, N, Mavromatis, K, Chen, A, Palaniappan, K, Chertkov, O, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Brettin, T, Detter, JC, Han, C, Rohde, M, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2010, 'Complete genome sequence of Segniliparus rotundus type strain (CDC 1076 T)', Standards in Genomic Sciences, vol. 2, no. 2, pp. 203-211. https://doi.org/10.4056/sigs.791633
Sikorski J, Lapidus A, Copeland A, Misra M, Glavina Del Rio T, Nolan M et al. Complete genome sequence of Segniliparus rotundus type strain (CDC 1076 T). Standards in Genomic Sciences. 2010;2(2):203-211. https://doi.org/10.4056/sigs.791633
Sikorski, Johannes ; Lapidus, Alla ; Copeland, Alex ; Misra, Monica ; Glavina Del Rio, Tijana ; Nolan, Matt ; Lucas, Susan ; Chen, Feng ; Tice, Hope ; Cheng, Jan Fang ; Jando, Marlen ; Schneider, Susanne ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Mikhailova, Natalia ; Pati, Amrita ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Chen, Amy ; Palaniappan, Krishna ; Chertkov, Olga ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Brettin, Thomas ; Detter, John C. ; Han, Cliff ; Rohde, Manfred ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of Segniliparus rotundus type strain (CDC 1076 T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 2. pp. 203-211.
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