Abstract
Planctomyces limnophilus Hirsch and Müller 1986 belongs to the order Planctomycetales, which differs from other bacterial taxa by several distinctive features such as internal cell compartmentalization, multiplication by forming buds directly from the spherical, ovoid or pear-shaped mother cell and a cell wall which is stabilized by a proteinaceous layer rather than a peptidoglycan layer. Besides Pirellula staleyi, this is the second completed genome se-quence of the family Planctomycetaceae. P. limnophilus is of interest because it differs from Pirellula by the presence of a stalk and its structure of fibril bundles, its cell shape and size, the formation of multicellular rosettes, low salt tolerance and red pigmented colonies. The 5,460,085 bp long genome with its 4,304 protein-coding and 66 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
| Original language | English (US) |
|---|---|
| Pages (from-to) | 47-56 |
| Number of pages | 10 |
| Journal | Standards in Genomic Sciences |
| Volume | 3 |
| Issue number | 1 |
| DOIs | |
| State | Published - 2010 |
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Keywords
- GEBA
- Gram-negative
- Low salt tolerance
- Multicellular rosettes
- Planctomycetales
- Planctomycetes
- Stalk
ASJC Scopus subject areas
- Genetics
Cite this
Complete genome sequence of planctomyces limnophilus type strain (mü 290 T). / Labutti, Kurt; Sikorski, Johannes; Schneider, Susanne; Nolan, Matt; Lucas, Susan; del Rio, Tijana Glavina; Tice, Hope; Cheng, Jan Fang; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Tindall, Brian J.; Rohde, Manfred; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Lapidus, Alla.
In: Standards in Genomic Sciences, Vol. 3, No. 1, 2010, p. 47-56.Research output: Contribution to journal › Article
}
TY - JOUR
T1 - Complete genome sequence of planctomyces limnophilus type strain (mü 290 T)
AU - Labutti, Kurt
AU - Sikorski, Johannes
AU - Schneider, Susanne
AU - Nolan, Matt
AU - Lucas, Susan
AU - del Rio, Tijana Glavina
AU - Tice, Hope
AU - Cheng, Jan Fang
AU - Goodwin, Lynne
AU - Pitluck, Sam
AU - Liolios, Konstantinos
AU - Ivanova, Natalia
AU - Mavromatis, Konstantinos
AU - Mikhailova, Natalia
AU - Pati, Amrita
AU - Chen, Amy
AU - Palaniappan, Krishna
AU - Land, Miriam
AU - Hauser, Loren
AU - Chang, Yun Juan
AU - Jeffries, Cynthia D.
AU - Tindall, Brian J.
AU - Rohde, Manfred
AU - Göker, Markus
AU - Woyke, Tanja
AU - Bristow, James
AU - Eisen, Jonathan A
AU - Markowitz, Victor
AU - Hugenholtz, Philip
AU - Kyrpides, Nikos C.
AU - Klenk, Hans Peter
AU - Lapidus, Alla
PY - 2010
Y1 - 2010
N2 - Planctomyces limnophilus Hirsch and Müller 1986 belongs to the order Planctomycetales, which differs from other bacterial taxa by several distinctive features such as internal cell compartmentalization, multiplication by forming buds directly from the spherical, ovoid or pear-shaped mother cell and a cell wall which is stabilized by a proteinaceous layer rather than a peptidoglycan layer. Besides Pirellula staleyi, this is the second completed genome se-quence of the family Planctomycetaceae. P. limnophilus is of interest because it differs from Pirellula by the presence of a stalk and its structure of fibril bundles, its cell shape and size, the formation of multicellular rosettes, low salt tolerance and red pigmented colonies. The 5,460,085 bp long genome with its 4,304 protein-coding and 66 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
AB - Planctomyces limnophilus Hirsch and Müller 1986 belongs to the order Planctomycetales, which differs from other bacterial taxa by several distinctive features such as internal cell compartmentalization, multiplication by forming buds directly from the spherical, ovoid or pear-shaped mother cell and a cell wall which is stabilized by a proteinaceous layer rather than a peptidoglycan layer. Besides Pirellula staleyi, this is the second completed genome se-quence of the family Planctomycetaceae. P. limnophilus is of interest because it differs from Pirellula by the presence of a stalk and its structure of fibril bundles, its cell shape and size, the formation of multicellular rosettes, low salt tolerance and red pigmented colonies. The 5,460,085 bp long genome with its 4,304 protein-coding and 66 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
KW - GEBA
KW - Gram-negative
KW - Low salt tolerance
KW - Multicellular rosettes
KW - Planctomycetales
KW - Planctomycetes
KW - Stalk
UR - http://www.scopus.com/inward/record.url?scp=79956137513&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=79956137513&partnerID=8YFLogxK
U2 - 10.4056/sigs.1052813
DO - 10.4056/sigs.1052813
M3 - Article
C2 - 21304691
AN - SCOPUS:79956137513
VL - 3
SP - 47
EP - 56
JO - Environmental Microbiomes
JF - Environmental Microbiomes
SN - 1944-3277
IS - 1
ER -