Complete genome sequence of Paludibacter propionicigenes type strain (WB4 T)

Sabine Gronow, Christine Munk, Alla Lapidus, Matt Nolan, Susan Lucas, Nancy Hammon, Shweta Deshpande, Jan Fang Cheng, Roxane Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam LandLoren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Evelyne Brambilla, Manfred Rohde, Markus Göker, John C. Detter, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

19 Scopus citations

Abstract

Paludibacter propionicigenes Ueki et al. 2006 is the type species of the genus Paludibacter, which belongs to the family Porphyromonadaceae. The species is of interest because of the position it occupies in the tree of life where it can be found in close proximity to members of the genus Dysgonomonas. This is the first completed genome sequence of a member of the genus Paludibacter and the third sequence from the family Porphyromonadaceae. The 3,685,504 bp long genome with its 3,054 protein-coding and 64 RNA genes consists of one circular chromosome and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)36-44
Number of pages9
JournalStandards in Genomic Sciences
Volume4
Issue number1
DOIs
StatePublished - 2011

Keywords

  • Anoxic rice-field soil
  • Chemoorganotrophic
  • GEBA
  • Gram-negative
  • Mesophilic
  • Nonmotile
  • Porphyromonadaceae
  • Strictly anaerobic

ASJC Scopus subject areas

  • Genetics

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    Gronow, S., Munk, C., Lapidus, A., Nolan, M., Lucas, S., Hammon, N., Deshpande, S., Cheng, J. F., Tapia, R., Han, C., Goodwin, L., Pitluck, S., Liolios, K., Ivanova, N., Mavromatis, K., Mikhailova, N., Pati, A., Chen, A., Palaniappan, K., ... Klenk, H. P. (2011). Complete genome sequence of Paludibacter propionicigenes type strain (WB4 T). Standards in Genomic Sciences, 4(1), 36-44. https://doi.org/10.4056/sigs.1503846