Complete genome sequence of Olsenella uli type strain (VPI D76D-27C T)

Markus Göker, Brittany Held, Susan Lucas, Matt Nolan, Montri Yasawong, Tijana Glavina del Rio, Hope Tice, Jan Fang Cheng, David Bruce, John C. Detter, Roxanne Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati, Amy ChenKrishna Palaniappan, Miriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Manfred Rohde, Johannes Sikorski, Rüdiger Pukall, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, Alla Lapidus

Research output: Contribution to journalArticle

19 Citations (Scopus)

Abstract

Olsenella uli (Olsen et al. 1991) Dewhirst et al. 2001 is the type species of the genus Olsenel-la, which belongs to the actinobacterial family Coriobacteriaceae. The species is of interest because it is frequently isolated from dental plaque in periodontitis patients and can cause primary endodontic infection. The species is a Gram-positive, non-motile and non-sporulating bacterium. The strain described in this study was isolated from human gingival crevices. This is the first completed sequence of the genus Olsenella and the fifth sequence from a member of the family Coriobacteriaceae. The 2,051,896 bp long genome with its 1,795 protein-coding and 55 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)76-84
Number of pages9
JournalStandards in Genomic Sciences
Volume3
Issue number1
DOIs
StatePublished - 2010

Fingerprint

Genome
Encyclopedias
Bacteria
Dental Plaque
Periodontitis
Endodontics
Archaea
RNA
Infection
Genes
Proteins

Keywords

  • Coriobacteriaceae
  • GEBA
  • Human gingival crevices
  • Microaerotolerant anaerobe
  • Primary endodontic infec-tions

ASJC Scopus subject areas

  • Genetics

Cite this

Göker, M., Held, B., Lucas, S., Nolan, M., Yasawong, M., del Rio, T. G., ... Lapidus, A. (2010). Complete genome sequence of Olsenella uli type strain (VPI D76D-27C T). Standards in Genomic Sciences, 3(1), 76-84. https://doi.org/10.4056/sigs.1082860

Complete genome sequence of Olsenella uli type strain (VPI D76D-27C T). / Göker, Markus; Held, Brittany; Lucas, Susan; Nolan, Matt; Yasawong, Montri; del Rio, Tijana Glavina; Tice, Hope; Cheng, Jan Fang; Bruce, David; Detter, John C.; Tapia, Roxanne; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Rohde, Manfred; Sikorski, Johannes; Pukall, Rüdiger; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Lapidus, Alla.

In: Standards in Genomic Sciences, Vol. 3, No. 1, 2010, p. 76-84.

Research output: Contribution to journalArticle

Göker, M, Held, B, Lucas, S, Nolan, M, Yasawong, M, del Rio, TG, Tice, H, Cheng, JF, Bruce, D, Detter, JC, Tapia, R, Han, C, Goodwin, L, Pitluck, S, Liolios, K, Ivanova, N, Mavromatis, K, Mikhailova, N, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Rohde, M, Sikorski, J, Pukall, R, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Lapidus, A 2010, 'Complete genome sequence of Olsenella uli type strain (VPI D76D-27C T)', Standards in Genomic Sciences, vol. 3, no. 1, pp. 76-84. https://doi.org/10.4056/sigs.1082860
Göker, Markus ; Held, Brittany ; Lucas, Susan ; Nolan, Matt ; Yasawong, Montri ; del Rio, Tijana Glavina ; Tice, Hope ; Cheng, Jan Fang ; Bruce, David ; Detter, John C. ; Tapia, Roxanne ; Han, Cliff ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Mikhailova, Natalia ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Rohde, Manfred ; Sikorski, Johannes ; Pukall, Rüdiger ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Lapidus, Alla. / Complete genome sequence of Olsenella uli type strain (VPI D76D-27C T). In: Standards in Genomic Sciences. 2010 ; Vol. 3, No. 1. pp. 76-84.
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