Complete genome sequence of odoribacter splanchnicus type strain (1651/6 T)

Markus Göker, Sabine Gronow, Ahmet Zeytun, Matt Nolan, Susan Lucas, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Jan Fang Cheng, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinikova, Amrita Pati, Roxane Tapia, Cliff Han, Lynne Goodwin, Amy ChenKrishna Palaniappan, Miriam Land, Loren Hauser, Cynthia D. Jeffries, Evelyne Marie Brambilla, Manfred Rohde, John C. Detter, Tanja Woyke, James Bristow, Victor Markowitz, Philip Hugenholtz, Jonathan A Eisen, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

27 Citations (Scopus)

Abstract

Odoribacter splanchnicus (Werner et al. 1975) Hardham et al. 2008 is the type species of the genus Odoribacter, which belongs to the family Porphyromonadaceae in the order 'Bacteroi-dales'. The species is of interest because members of the Odoribacter form an isolated cluster within the Porphyromonadaceae. This is the first completed genome sequence of a member of the genus Odoribacter and the fourth sequence from the family Porphyromonadaceae. The 4,392,288 bp long genome with its 3,672 protein-coding and 74 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)200-209
Number of pages10
JournalStandards in Genomic Sciences
Volume4
Issue number2
DOIs
StatePublished - 2011

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Genome
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Archaea
RNA
Bacteria
Genes
Proteins

Keywords

  • Chemoorganotrophic
  • GEBA
  • Gram-negative
  • Mesophil-ic
  • Non-motile
  • Opportunistic pathogen
  • Porphyromonadaceae
  • Strictly anaerobic

ASJC Scopus subject areas

  • Genetics

Cite this

Göker, M., Gronow, S., Zeytun, A., Nolan, M., Lucas, S., Lapidus, A., ... Klenk, H. P. (2011). Complete genome sequence of odoribacter splanchnicus type strain (1651/6 T). Standards in Genomic Sciences, 4(2), 200-209. https://doi.org/10.4056/sigs.1714269

Complete genome sequence of odoribacter splanchnicus type strain (1651/6 T). / Göker, Markus; Gronow, Sabine; Zeytun, Ahmet; Nolan, Matt; Lucas, Susan; Lapidus, Alla; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan Fang; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Mavromatis, Konstantinos; Ovchinikova, Galina; Pati, Amrita; Tapia, Roxane; Han, Cliff; Goodwin, Lynne; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Jeffries, Cynthia D.; Brambilla, Evelyne Marie; Rohde, Manfred; Detter, John C.; Woyke, Tanja; Bristow, James; Markowitz, Victor; Hugenholtz, Philip; Eisen, Jonathan A; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 4, No. 2, 2011, p. 200-209.

Research output: Contribution to journalArticle

Göker, M, Gronow, S, Zeytun, A, Nolan, M, Lucas, S, Lapidus, A, Hammon, N, Deshpande, S, Cheng, JF, Pitluck, S, Liolios, K, Pagani, I, Ivanova, N, Mavromatis, K, Ovchinikova, G, Pati, A, Tapia, R, Han, C, Goodwin, L, Chen, A, Palaniappan, K, Land, M, Hauser, L, Jeffries, CD, Brambilla, EM, Rohde, M, Detter, JC, Woyke, T, Bristow, J, Markowitz, V, Hugenholtz, P, Eisen, JA, Kyrpides, NC & Klenk, HP 2011, 'Complete genome sequence of odoribacter splanchnicus type strain (1651/6 T)', Standards in Genomic Sciences, vol. 4, no. 2, pp. 200-209. https://doi.org/10.4056/sigs.1714269
Göker, Markus ; Gronow, Sabine ; Zeytun, Ahmet ; Nolan, Matt ; Lucas, Susan ; Lapidus, Alla ; Hammon, Nancy ; Deshpande, Shweta ; Cheng, Jan Fang ; Pitluck, Sam ; Liolios, Konstantinos ; Pagani, Ioanna ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Ovchinikova, Galina ; Pati, Amrita ; Tapia, Roxane ; Han, Cliff ; Goodwin, Lynne ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Jeffries, Cynthia D. ; Brambilla, Evelyne Marie ; Rohde, Manfred ; Detter, John C. ; Woyke, Tanja ; Bristow, James ; Markowitz, Victor ; Hugenholtz, Philip ; Eisen, Jonathan A ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of odoribacter splanchnicus type strain (1651/6 T). In: Standards in Genomic Sciences. 2011 ; Vol. 4, No. 2. pp. 200-209.
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