Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1 T)

Iain Anderson, Johannes Sikorski, Ahmet Zeytun, Matt Nolan, Alla Lapidus, Susan Lucas, Nancy Hammon, Shweta Deshpande, Jan Fang Cheng, Roxanne Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Ivanova, Marcel Huntemann, Konstantinos Mavromatis, Galina Ovchinikova, Amrita PatiAmy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Evelyne Marie Brambilla, Olivier D. Ngatchou-Djao, Manfred Rohde, Brian J. Tindall, Markus Göker, John C. Detter, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Hans Peter Klenk, Nikos C. Kyrpides

Research output: Contribution to journalArticle

8 Citations (Scopus)

Abstract

Nitratifractor salsuginis Nakagawa et al. 2005 is the type species of the genus Nitratifractor, a member of the family Nautiliaceae. The species is of interest because of its high capacity for nitrate reduction via conversion to N 2 through respiration, which is a key compound in plant nutrition. The strain is also of interest because it represents the first mesophilic and facultatively anaerobic member of the Epsilonproteobacteria reported to grow on molecular hydrogen. This is the first completed genome sequence of a member of the genus Nitratifractor and the second sequence from the family Nautiliaceae. The 2,101,285 bp long genome with its 2,121 protein-coding and 54 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)322-330
Number of pages9
JournalStandards in Genomic Sciences
Volume4
Issue number3
DOIs
StatePublished - 2011

Fingerprint

Epsilonproteobacteria
Genome
Encyclopedias
Archaea
Nitrates
Hydrogen
Respiration
RNA
Bacteria
Genes
Proteins

Keywords

  • Anaerobic
  • GEBA
  • Gram-negative
  • Mesophilic
  • Microaerobic
  • Nautiliaceae
  • Non-motile
  • Strictly chemo-lithoautotroph

ASJC Scopus subject areas

  • Genetics

Cite this

Anderson, I., Sikorski, J., Zeytun, A., Nolan, M., Lapidus, A., Lucas, S., ... Kyrpides, N. C. (2011). Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1 T). Standards in Genomic Sciences, 4(3), 322-330. https://doi.org/10.4056/sigs.1844518

Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1 T). / Anderson, Iain; Sikorski, Johannes; Zeytun, Ahmet; Nolan, Matt; Lapidus, Alla; Lucas, Susan; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan Fang; Tapia, Roxanne; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Huntemann, Marcel; Mavromatis, Konstantinos; Ovchinikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Brambilla, Evelyne Marie; Ngatchou-Djao, Olivier D.; Rohde, Manfred; Tindall, Brian J.; Göker, Markus; Detter, John C.; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Klenk, Hans Peter; Kyrpides, Nikos C.

In: Standards in Genomic Sciences, Vol. 4, No. 3, 2011, p. 322-330.

Research output: Contribution to journalArticle

Anderson, I, Sikorski, J, Zeytun, A, Nolan, M, Lapidus, A, Lucas, S, Hammon, N, Deshpande, S, Cheng, JF, Tapia, R, Han, C, Goodwin, L, Pitluck, S, Liolios, K, Pagani, I, Ivanova, N, Huntemann, M, Mavromatis, K, Ovchinikova, G, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Brambilla, EM, Ngatchou-Djao, OD, Rohde, M, Tindall, BJ, Göker, M, Detter, JC, Woyke, T, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Klenk, HP & Kyrpides, NC 2011, 'Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1 T)', Standards in Genomic Sciences, vol. 4, no. 3, pp. 322-330. https://doi.org/10.4056/sigs.1844518
Anderson, Iain ; Sikorski, Johannes ; Zeytun, Ahmet ; Nolan, Matt ; Lapidus, Alla ; Lucas, Susan ; Hammon, Nancy ; Deshpande, Shweta ; Cheng, Jan Fang ; Tapia, Roxanne ; Han, Cliff ; Goodwin, Lynne ; Pitluck, Sam ; Liolios, Konstantinos ; Pagani, Ioanna ; Ivanova, Natalia ; Huntemann, Marcel ; Mavromatis, Konstantinos ; Ovchinikova, Galina ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Brambilla, Evelyne Marie ; Ngatchou-Djao, Olivier D. ; Rohde, Manfred ; Tindall, Brian J. ; Göker, Markus ; Detter, John C. ; Woyke, Tanja ; Bristow, James ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Klenk, Hans Peter ; Kyrpides, Nikos C. / Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1 T). In: Standards in Genomic Sciences. 2011 ; Vol. 4, No. 3. pp. 322-330.
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