Complete genome sequence of Nakamurella multipartita type strain (Y-104 T)

Hope Tice; Shanmugam Mayilraj; David Sims; Alla Lapidus; Matt Nolan; Susan Lucas; Tijana Glavina Del Rio; Alex Copeland; Jan Fang Cheng; Linda Meincke; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Ivanova; Konstantinos Mavromatis; Galina Ovchinnikova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun Juan Chang; Cynthia D. Jeffries; John C. Detter; Thomas Brettin; Manfred Rohde; Markus Göker; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C. Kyrpides; Hans Peter Klenk; Feng Chen

doi:10.4056/sigs.721316

Complete genome sequence of Nakamurella multipartita type strain (Y-104 ^T)

Hope Tice, Shanmugam Mayilraj, David Sims, Alla Lapidus, Matt Nolan, Susan Lucas, Tijana Glavina Del Rio, Alex Copeland, Jan Fang Cheng, Linda Meincke, David Bruce, Lynne Goodwin, Sam Pitluck, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam LandLoren Hauser, Yun Juan Chang, Cynthia D. Jeffries, John C. Detter, Thomas Brettin, Manfred Rohde, Markus Göker, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, Feng Chen

Medical Microbiology and Immunology

Research output: Contribution to journal › Article › peer-review

29 Scopus citations

Abstract

Nakamurella multipartita (Yoshimi et al. 1996) Tao et al. 2004 is the type species of the mo-nospecific genus Nakamurella in the actinobacterial suborder Frankineae. The nonmotile, coccus-shaped strain was isolated from activated sludge acclimated with sugar-containing synthetic wastewater, and is capable of accumulating large amounts of polysaccharides in its cells. Here we describe the features of the organism, together with the complete genome se-quence and annotation. This is the first complete genome sequence of a member of the family Nakamurellaceae. The 6,060,298 bp long single replicon genome with its 5415 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original language	English (US)
Pages (from-to)	168-175
Number of pages	8
Journal	Standards in Genomic Sciences
Volume	2
Issue number	2
DOIs	https://doi.org/10.4056/sigs.721316
State	Published - 2010

Keywords

(H )
Frankineae
GEBA
Gram-positive
Microsphaeraceae
MK-8
Nonmotile
Polysaccharide-accumulating
Septa-forming

ASJC Scopus subject areas

Genetics

Access to Document

10.4056/sigs.721316

Cite this

Tice, H., Mayilraj, S., Sims, D., Lapidus, A., Nolan, M., Lucas, S., Glavina Del Rio, T., Copeland, A., Cheng, J. F., Meincke, L., Bruce, D., Goodwin, L., Pitluck, S., Ivanova, N., Mavromatis, K., Ovchinnikova, G., Pati, A., Chen, A., Palaniappan, K., ... Chen, F. (2010). Complete genome sequence of Nakamurella multipartita type strain (Y-104 ^T). Standards in Genomic Sciences, 2(2), 168-175. https://doi.org/10.4056/sigs.721316

Complete genome sequence of Nakamurella multipartita type strain (Y-104 ^T). / Tice, Hope; Mayilraj, Shanmugam; Sims, David; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Glavina Del Rio, Tijana; Copeland, Alex; Cheng, Jan Fang; Meincke, Linda; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Ivanova, Natalia; Mavromatis, Konstantinos; Ovchinnikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Detter, John C.; Brettin, Thomas; Rohde, Manfred; Göker, Markus; Bristow, Jim; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter; Chen, Feng.

In: Standards in Genomic Sciences, Vol. 2, No. 2, 2010, p. 168-175.

Research output: Contribution to journal › Article › peer-review

Tice, H, Mayilraj, S, Sims, D, Lapidus, A, Nolan, M, Lucas, S, Glavina Del Rio, T, Copeland, A, Cheng, JF, Meincke, L, Bruce, D, Goodwin, L, Pitluck, S, Ivanova, N, Mavromatis, K, Ovchinnikova, G, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Detter, JC, Brettin, T, Rohde, M, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC, Klenk, HP & Chen, F 2010, 'Complete genome sequence of Nakamurella multipartita type strain (Y-104 ^T)', Standards in Genomic Sciences, vol. 2, no. 2, pp. 168-175. https://doi.org/10.4056/sigs.721316

Tice, Hope ; Mayilraj, Shanmugam ; Sims, David ; Lapidus, Alla ; Nolan, Matt ; Lucas, Susan ; Glavina Del Rio, Tijana ; Copeland, Alex ; Cheng, Jan Fang ; Meincke, Linda ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Ivanova, Natalia ; Mavromatis, Konstantinos ; Ovchinnikova, Galina ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Detter, John C. ; Brettin, Thomas ; Rohde, Manfred ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter ; Chen, Feng. / Complete genome sequence of Nakamurella multipartita type strain (Y-104 ^T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 2. pp. 168-175.

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