Complete genome sequence of Nakamurella multipartita type strain (Y-104 T)

Hope Tice, Shanmugam Mayilraj, David Sims, Alla Lapidus, Matt Nolan, Susan Lucas, Tijana Glavina Del Rio, Alex Copeland, Jan Fang Cheng, Linda Meincke, David Bruce, Lynne Goodwin, Sam Pitluck, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam LandLoren Hauser, Yun Juan Chang, Cynthia D. Jeffries, John C. Detter, Thomas Brettin, Manfred Rohde, Markus Göker, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, Feng Chen

Research output: Contribution to journalArticle

25 Scopus citations

Abstract

Nakamurella multipartita (Yoshimi et al. 1996) Tao et al. 2004 is the type species of the mo-nospecific genus Nakamurella in the actinobacterial suborder Frankineae. The nonmotile, coccus-shaped strain was isolated from activated sludge acclimated with sugar-containing synthetic wastewater, and is capable of accumulating large amounts of polysaccharides in its cells. Here we describe the features of the organism, together with the complete genome se-quence and annotation. This is the first complete genome sequence of a member of the family Nakamurellaceae. The 6,060,298 bp long single replicon genome with its 5415 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)168-175
Number of pages8
JournalStandards in Genomic Sciences
Volume2
Issue number2
DOIs
StatePublished - 2010

Keywords

  • (H )
  • Frankineae
  • GEBA
  • Gram-positive
  • Microsphaeraceae
  • MK-8
  • Nonmotile
  • Polysaccharide-accumulating
  • Septa-forming

ASJC Scopus subject areas

  • Genetics

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  • Cite this

    Tice, H., Mayilraj, S., Sims, D., Lapidus, A., Nolan, M., Lucas, S., Glavina Del Rio, T., Copeland, A., Cheng, J. F., Meincke, L., Bruce, D., Goodwin, L., Pitluck, S., Ivanova, N., Mavromatis, K., Ovchinnikova, G., Pati, A., Chen, A., Palaniappan, K., ... Chen, F. (2010). Complete genome sequence of Nakamurella multipartita type strain (Y-104 T). Standards in Genomic Sciences, 2(2), 168-175. https://doi.org/10.4056/sigs.721316