Complete genome sequence of leptotrichia buccalis type strain (C-1013-b T)

Natalia Ivanova, Sabine Gronow, Alla Lapidus, Alex Copeland, Tijana Glavina del Rio, Matt Nolan, Susan Lucas, Feng Chen, Hope Tice, Jan Fang Cheng, Elizabeth Saunders, David Bruce, Lynne Goodwin, Thomas Brettin, John C. Detter, Cliff Han, Sam Pitluck, Natalia Mikhailova, Amrita Pati, Konstantinos MavrommatisAmy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Patrick Chain, Christine Rohde, Markus Göker, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

12 Citations (Scopus)

Abstract

Leptotrichia buccalis (Robin 1853) Trevisan 1879 is the type species of the genus, and is of phylogenetic interest because of its isolated location in the sparsely populated and neither taxonomically nor genomically adequately accessed family 'Leptotrichiaceae' within the phylum 'Fusobacteria'. Species of Leptotrichia are large, fusiform, non-motile, non-sporulating rods, which often populate the human oral flora. L. buccalis is anaerobic to aerotolerant, and saccharolytic. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of the order 'Fusobacteriales' and no more than the second sequence from the phylum 'Fusobacteria'. The 2,465,610 bp long single replicon genome with its 2306 protein-coding and 61 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)126-132
Number of pages7
JournalStandards in Genomic Sciences
Volume1
Issue number2
DOIs
StatePublished - 2009
Externally publishedYes

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Leptotrichia
Fusobacteria
Genome
Encyclopedias
Replicon
Songbirds
Archaea
RNA
Bacteria
Genes
Proteins

Keywords

  • Anaerobic
  • Dental plaque
  • Fusobacteria
  • Gram-negative fusiform rods
  • Human oral microflora
  • Leptotrichiaceae
  • Non-motile
  • Non-sporulating

ASJC Scopus subject areas

  • Genetics

Cite this

Ivanova, N., Gronow, S., Lapidus, A., Copeland, A., del Rio, T. G., Nolan, M., ... Klenk, H. P. (2009). Complete genome sequence of leptotrichia buccalis type strain (C-1013-b T). Standards in Genomic Sciences, 1(2), 126-132. https://doi.org/10.4056/sigs.1854

Complete genome sequence of leptotrichia buccalis type strain (C-1013-b T). / Ivanova, Natalia; Gronow, Sabine; Lapidus, Alla; Copeland, Alex; del Rio, Tijana Glavina; Nolan, Matt; Lucas, Susan; Chen, Feng; Tice, Hope; Cheng, Jan Fang; Saunders, Elizabeth; Bruce, David; Goodwin, Lynne; Brettin, Thomas; Detter, John C.; Han, Cliff; Pitluck, Sam; Mikhailova, Natalia; Pati, Amrita; Mavrommatis, Konstantinos; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Chain, Patrick; Rohde, Christine; Göker, Markus; Bristow, Jim; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C.; Klenk, Hans Peter.

In: Standards in Genomic Sciences, Vol. 1, No. 2, 2009, p. 126-132.

Research output: Contribution to journalArticle

Ivanova, N, Gronow, S, Lapidus, A, Copeland, A, del Rio, TG, Nolan, M, Lucas, S, Chen, F, Tice, H, Cheng, JF, Saunders, E, Bruce, D, Goodwin, L, Brettin, T, Detter, JC, Han, C, Pitluck, S, Mikhailova, N, Pati, A, Mavrommatis, K, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Chain, P, Rohde, C, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Kyrpides, NC & Klenk, HP 2009, 'Complete genome sequence of leptotrichia buccalis type strain (C-1013-b T)', Standards in Genomic Sciences, vol. 1, no. 2, pp. 126-132. https://doi.org/10.4056/sigs.1854
Ivanova N, Gronow S, Lapidus A, Copeland A, del Rio TG, Nolan M et al. Complete genome sequence of leptotrichia buccalis type strain (C-1013-b T). Standards in Genomic Sciences. 2009;1(2):126-132. https://doi.org/10.4056/sigs.1854
Ivanova, Natalia ; Gronow, Sabine ; Lapidus, Alla ; Copeland, Alex ; del Rio, Tijana Glavina ; Nolan, Matt ; Lucas, Susan ; Chen, Feng ; Tice, Hope ; Cheng, Jan Fang ; Saunders, Elizabeth ; Bruce, David ; Goodwin, Lynne ; Brettin, Thomas ; Detter, John C. ; Han, Cliff ; Pitluck, Sam ; Mikhailova, Natalia ; Pati, Amrita ; Mavrommatis, Konstantinos ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Chain, Patrick ; Rohde, Christine ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Kyrpides, Nikos C. ; Klenk, Hans Peter. / Complete genome sequence of leptotrichia buccalis type strain (C-1013-b T). In: Standards in Genomic Sciences. 2009 ; Vol. 1, No. 2. pp. 126-132.
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AU - del Rio, Tijana Glavina

AU - Nolan, Matt

AU - Lucas, Susan

AU - Chen, Feng

AU - Tice, Hope

AU - Cheng, Jan Fang

AU - Saunders, Elizabeth

AU - Bruce, David

AU - Goodwin, Lynne

AU - Brettin, Thomas

AU - Detter, John C.

AU - Han, Cliff

AU - Pitluck, Sam

AU - Mikhailova, Natalia

AU - Pati, Amrita

AU - Mavrommatis, Konstantinos

AU - Chen, Amy

AU - Palaniappan, Krishna

AU - Land, Miriam

AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Chain, Patrick

AU - Rohde, Christine

AU - Göker, Markus

AU - Bristow, Jim

AU - Eisen, Jonathan A

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Kyrpides, Nikos C.

AU - Klenk, Hans Peter

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