Complete genome sequence of Kribbella flavida type strain (IFO 14399 T)

Rüdiger Pukall, Alla Lapidus, Tijana Glavina Del Rio, Alex Copeland, Hope Tice, Jan Fang Cheng, Susan Lucas, Feng Chen, Matt Nolan, Kurt Labutti, Amrita Pati, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Sam Pitluck, David Bruce, Lynne Goodwin, Miriam Land, Loren Hauser, Yun Juan ChangCynthia D. Jeffries, Amy Chen, Krishna Palaniappan, Patrick Chain, Manfred Rohde, Markus Göker, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, Thomas Brettin

Research output: Contribution to journalArticle

6 Scopus citations

Abstract

The genus Kribbella consists of 15 species, with Kribbella flavida (Park et al. 1999) as the type species. The name Kribbella was formed from the acronym of the Korea Research Institute of Bioscience and Biotechnology, KRIBB. Strains of the various Kribbella species were originally isolated from soil, potato, alum slate mine, patinas of catacombs or from horse racecourses. Here we describe the features of K. flavida together with the complete genome sequence and annotation. In addition to the 5.3 Mbp genome of Nocardioides sp. JS614, this is only the second completed genome sequence of the family Nocardioidaceae. The 7,579,488 bp long genome with its 7,086 protein-coding and 60 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)186-193
Number of pages8
JournalStandards in Genomic Sciences
Volume2
Issue number2
DOIs
StatePublished - 2010

Keywords

  • Actinobacteria
  • Aerobic
  • GEBA
  • Ll-diaminopimelic acid
  • Mycelia
  • Nocardioidaceae
  • Propionibacterineae
  • Soil

ASJC Scopus subject areas

  • Genetics

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    Pukall, R., Lapidus, A., Del Rio, T. G., Copeland, A., Tice, H., Cheng, J. F., Lucas, S., Chen, F., Nolan, M., Labutti, K., Pati, A., Ivanova, N., Mavromatis, K., Mikhailova, N., Pitluck, S., Bruce, D., Goodwin, L., Land, M., Hauser, L., ... Brettin, T. (2010). Complete genome sequence of Kribbella flavida type strain (IFO 14399 T). Standards in Genomic Sciences, 2(2), 186-193. https://doi.org/10.4056/sigs.731321