Complete genome sequence of Kangiella koreensis type strain (SW-125 T)

Cliff Han, Johannes Sikorski, Alla Lapidus, Matt Nolan, Tijana Glavina del Rio, Hope Tice, Jan Fang Cheng, Susan Lucas, Feng Chen, Alex Copeland, Natalia Ivanova, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati, David Bruce, Lynne Goodwin, Sam Pitluck, Amy Chen, Krishna Palaniappan, Miriam LandLoren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Patrick Chain, Elizabeth Saunders, Thomas Brettin, Markus Göker, Brian J. Tindall, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, John C. Detter

Research output: Contribution to journalArticle

12 Scopus citations

Abstract

Kangiella koreensis (Yoon et al. 2004) is the type species of the genus and is of phylogenetic interest because of the very isolated location of the genus Kangiella in the gammaproteobacterial order Oceanospirillales. K. koreensis SW-125 T is a Gram-negative, non-motile, nonspore-forming bacterium isolated from tidal flat sediments at Daepo Beach, Yellow Sea, Korea. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence from the genus Kangiella and only the fourth genome from the order Oceanospirillales. This 2,852,073 bp long single replicon genome with its 2647 protein-coding and 48 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)226-233
Number of pages8
JournalStandards in Genomic Sciences
Volume1
Issue number3
DOIs
StatePublished - 2009

Keywords

  • Aerobic and anaerobic growth
  • Mesophile
  • Non-pathogenic
  • Oceanospirillales

ASJC Scopus subject areas

  • Genetics

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    Han, C., Sikorski, J., Lapidus, A., Nolan, M., del Rio, T. G., Tice, H., Cheng, J. F., Lucas, S., Chen, F., Copeland, A., Ivanova, N., Mavromatis, K., Ovchinnikova, G., Pati, A., Bruce, D., Goodwin, L., Pitluck, S., Chen, A., Palaniappan, K., ... Detter, J. C. (2009). Complete genome sequence of Kangiella koreensis type strain (SW-125 T). Standards in Genomic Sciences, 1(3), 226-233. https://doi.org/10.4056/sigs.36635