Complete genome sequence of haliscomenobacter hydrossis type strain (O T)

Hajnalka Daligault, Alla Lapidus, Ahmet Zeytun, Matt Nolan, Susan Lucas, Tijana Glavina del Rio, Hope Tice, Jan Fang Cheng, Roxanne Tapia, Cliff Han, Lynne Goodwin, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Ivanova, Marcel Huntemann, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati, Amy ChenKrishna Palaniappan, Miriam Land, Loren Hauser, Evelyne Marie Brambilla, Manfred Rohde, Susanne Verbarg, Markus Göker, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk, Tanja Woyke

Research output: Contribution to journalArticle

15 Scopus citations

Abstract

Haliscomenobacter hydrossis van Veen et al. 1973 is the type species of the genus Halisco-menobacter, which belongs to order Sphingobacteriales. The species is of interest because of its isolated phylogenetic location in the tree of life, especially the so far genomically uncharted part of it, and because the organism grows in a thin, hardly visible hyaline sheath. Members of the species were isolated from fresh water of lakes and from ditch water. The genome of H. hydrossis is the first completed genome sequence reported from a member of the family Saprospiraceae. The 8,771,651 bp long genome with its three plasmids of 92 kbp, 144 kbp and 164 kbp length contains 6,848 protein-coding and 60 RNA genes, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)352-360
Number of pages9
JournalStandards in Genomic Sciences
Volume4
Issue number3
DOIs
StatePublished - 2011

Keywords

  • Branching
  • Chemoorganotrophic
  • GEBA
  • Gram-negative
  • Mesophilic
  • Non-motile
  • Saprospiraceae
  • Sheathed
  • Strictly aerobic

ASJC Scopus subject areas

  • Genetics

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    Daligault, H., Lapidus, A., Zeytun, A., Nolan, M., Lucas, S., del Rio, T. G., Tice, H., Cheng, J. F., Tapia, R., Han, C., Goodwin, L., Pitluck, S., Liolios, K., Pagani, I., Ivanova, N., Huntemann, M., Mavromatis, K., Mikhailova, N., Pati, A., ... Woyke, T. (2011). Complete genome sequence of haliscomenobacter hydrossis type strain (O T). Standards in Genomic Sciences, 4(3), 352-360. https://doi.org/10.4056/sigs.1964579