Complete genome sequence of Gordonia bronchialis type strain (3410 T)

Natalia Ivanova, Johannes Sikorski, Marlen Jando, Alla Lapidus, Matt Nolan, Susan Lucas, Tijana Glavina del Rio, Hope Tice, Alex Copeland, Jan Fang Cheng, Feng Chen, David Bruce, Lynne Goodwin, Sam Pitluck, Konstantinos Mavromatis, Galina Ovchinnikova, Amrita Pati, Amy Chen, Krishna Palaniappan, Miriam LandLoren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Patrick Chain, Elizabeth Saunders, Cliff Han, John C. Detter, Thomas Brettin, Manfred Rohde, Markus Göker, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Hans Peter Klenk, Nikos C. Kyrpides

Research output: Contribution to journalArticle

18 Citations (Scopus)

Abstract

Gordonia bronchialis Tsukamura 1971 is the type species of the genus. G. bronchialis is a human-pathogenic organism that has been isolated from a large variety of human tissues. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of the family Gordoniaceae. The 5,290,012 bp long genome with its 4,944 protein-coding and 55 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)19-28
Number of pages10
JournalStandards in Genomic Sciences
Volume2
Issue number1
DOIs
StatePublished - 2010

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Genome
Encyclopedias
Archaea
RNA
Bacteria
Genes
Proteins

Keywords

  • Endocarditis
  • GEBA
  • Gordoniaceae
  • Gram-positive
  • Human-pathogenic
  • Non-motile
  • Obligate aerobic

ASJC Scopus subject areas

  • Genetics

Cite this

Ivanova, N., Sikorski, J., Jando, M., Lapidus, A., Nolan, M., Lucas, S., ... Kyrpides, N. C. (2010). Complete genome sequence of Gordonia bronchialis type strain (3410 T). Standards in Genomic Sciences, 2(1), 19-28. https://doi.org/10.4056/sigs.611106

Complete genome sequence of Gordonia bronchialis type strain (3410 T). / Ivanova, Natalia; Sikorski, Johannes; Jando, Marlen; Lapidus, Alla; Nolan, Matt; Lucas, Susan; del Rio, Tijana Glavina; Tice, Hope; Copeland, Alex; Cheng, Jan Fang; Chen, Feng; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Mavromatis, Konstantinos; Ovchinnikova, Galina; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun Juan; Jeffries, Cynthia D.; Chain, Patrick; Saunders, Elizabeth; Han, Cliff; Detter, John C.; Brettin, Thomas; Rohde, Manfred; Göker, Markus; Bristow, Jim; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Klenk, Hans Peter; Kyrpides, Nikos C.

In: Standards in Genomic Sciences, Vol. 2, No. 1, 2010, p. 19-28.

Research output: Contribution to journalArticle

Ivanova, N, Sikorski, J, Jando, M, Lapidus, A, Nolan, M, Lucas, S, del Rio, TG, Tice, H, Copeland, A, Cheng, JF, Chen, F, Bruce, D, Goodwin, L, Pitluck, S, Mavromatis, K, Ovchinnikova, G, Pati, A, Chen, A, Palaniappan, K, Land, M, Hauser, L, Chang, YJ, Jeffries, CD, Chain, P, Saunders, E, Han, C, Detter, JC, Brettin, T, Rohde, M, Göker, M, Bristow, J, Eisen, JA, Markowitz, V, Hugenholtz, P, Klenk, HP & Kyrpides, NC 2010, 'Complete genome sequence of Gordonia bronchialis type strain (3410 T)', Standards in Genomic Sciences, vol. 2, no. 1, pp. 19-28. https://doi.org/10.4056/sigs.611106
Ivanova, Natalia ; Sikorski, Johannes ; Jando, Marlen ; Lapidus, Alla ; Nolan, Matt ; Lucas, Susan ; del Rio, Tijana Glavina ; Tice, Hope ; Copeland, Alex ; Cheng, Jan Fang ; Chen, Feng ; Bruce, David ; Goodwin, Lynne ; Pitluck, Sam ; Mavromatis, Konstantinos ; Ovchinnikova, Galina ; Pati, Amrita ; Chen, Amy ; Palaniappan, Krishna ; Land, Miriam ; Hauser, Loren ; Chang, Yun Juan ; Jeffries, Cynthia D. ; Chain, Patrick ; Saunders, Elizabeth ; Han, Cliff ; Detter, John C. ; Brettin, Thomas ; Rohde, Manfred ; Göker, Markus ; Bristow, Jim ; Eisen, Jonathan A ; Markowitz, Victor ; Hugenholtz, Philip ; Klenk, Hans Peter ; Kyrpides, Nikos C. / Complete genome sequence of Gordonia bronchialis type strain (3410 T). In: Standards in Genomic Sciences. 2010 ; Vol. 2, No. 1. pp. 19-28.
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AU - Lucas, Susan

AU - del Rio, Tijana Glavina

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AU - Cheng, Jan Fang

AU - Chen, Feng

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AU - Hauser, Loren

AU - Chang, Yun Juan

AU - Jeffries, Cynthia D.

AU - Chain, Patrick

AU - Saunders, Elizabeth

AU - Han, Cliff

AU - Detter, John C.

AU - Brettin, Thomas

AU - Rohde, Manfred

AU - Göker, Markus

AU - Bristow, Jim

AU - Eisen, Jonathan A

AU - Markowitz, Victor

AU - Hugenholtz, Philip

AU - Klenk, Hans Peter

AU - Kyrpides, Nikos C.

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