Complete genome sequence of Dolosigranulum pigrum from a patient with interstitial lung disease using single-molecule real-time sequencing technology

Rituparna Mukhopadhyay, Joselita Joaquin, Robin Hogue, Susan Fitzgerald, Guillaume Jospin, Kristin Mars, Jonathan A Eisen, Vishnu Chaturvedi

Research output: Contribution to journalArticle

Abstract

The whole genome sequence of Dolosigranulum pigrum isolated from the blood of a patient with interstitial lung disease was sequenced with the Pacific Biosciences RS II platform. The genome size is 2.1 Mb with 2,127 annotated coding sequences; it contained two clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated proteins (Cas) systems.

Original languageEnglish (US)
Article numbere00317-17
JournalGenome Announcements
Volume5
Issue number18
DOIs
StatePublished - 2017

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Clustered Regularly Interspaced Short Palindromic Repeats
Interstitial Lung Diseases
Genome
Technology
Genome Size
Proteins

ASJC Scopus subject areas

  • Genetics
  • Molecular Biology

Cite this

Complete genome sequence of Dolosigranulum pigrum from a patient with interstitial lung disease using single-molecule real-time sequencing technology. / Mukhopadhyay, Rituparna; Joaquin, Joselita; Hogue, Robin; Fitzgerald, Susan; Jospin, Guillaume; Mars, Kristin; Eisen, Jonathan A; Chaturvedi, Vishnu.

In: Genome Announcements, Vol. 5, No. 18, e00317-17, 2017.

Research output: Contribution to journalArticle

Mukhopadhyay, Rituparna ; Joaquin, Joselita ; Hogue, Robin ; Fitzgerald, Susan ; Jospin, Guillaume ; Mars, Kristin ; Eisen, Jonathan A ; Chaturvedi, Vishnu. / Complete genome sequence of Dolosigranulum pigrum from a patient with interstitial lung disease using single-molecule real-time sequencing technology. In: Genome Announcements. 2017 ; Vol. 5, No. 18.
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