Complete genome sequence of Deinococcus maricopensis type strain (LB-34 T)

Rüdiger Pukall, Ahmet Zeytun, Susan Lucas, Alla Lapidus, Nancy Hammon, Shweta Deshpande, Matt Nolan, Jan Fang Cheng, Sam Pitluck, Konstantinos Liolios, Ioanna Pagani, Natalia Mikhailova, Natalia Ivanova, Konstantinos Mavromatis, Amrita Pati, Roxane Tapia, Cliff Han, Lynne Goodwin, Amy Chen, Krishna PalaniappanMiriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Evelyne Marie Brambilla, Manfred Rohde, Markus Göker, J. Chris Detter, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

13 Scopus citations

Abstract

Deinococcus maricopensis (Rainey and da Costa 2005) is a member of the genus Deinococ-cus, which is comprised of 44 validly named species and is located within the deeply branching bacterial phylum Deinococcus-Thermus. Strain LB-34T was isolated from a soil sample from the Sonoran Desert in Arizona. Various species of the genus Deinococcus are characterized by extreme radiation resistance, with D. maricopensis being resistant in excess of 10 kGy. Even though the genomes of three Deinococcus species, D. radiodurans, D. geo-thermalis and D. deserti, have already been published, no special physiological characteristic is currently known that is unique to this group. It is therefore of special interest to analyze the genomes of additional species of the genus Deinococcus to better understand how these spe-cies adapted to gamma- or UV ionizing-radiation. The 3,498,530 bp long genome of D. ma-ricopensis with its 3,301 protein-coding and 66 RNA genes consists of one circular chromo-some and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)163-172
Number of pages10
JournalStandards in Genomic Sciences
Volume4
Issue number2
DOIs
StatePublished - 2011

Keywords

  • Aerobic
  • Chemoorga-notrophic
  • Deinococcaceae
  • GEBA
  • Gram-positive
  • Mesophilic
  • Non-motile
  • Radiation-resistant

ASJC Scopus subject areas

  • Genetics

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