Complete genome sequence of Actinosynnema mirum type strain (101 T)

Miriam Land, Alla Lapidus, Shanmugam Mayilraj, Feng Chen, Alex Copeland, Tijana Glavina del Rio, Matt Nolan, Susan Lucas, Hope Tice, Jan Fang Cheng, Olga Chertkov, David Bruce, Lynne Goodwin, Sam Pitluck, Manfred Rohde, Markus Göker, Amrita Pati, Natalia Ivanova, Konstantinos Mavromatis, Amy ChenKrishna Palaniappan, Loren Hauser, Yun Juan Chang, Cynthia C. Jeffries, Thomas Brettin, John C. Detter, Cliff Han, Patrick Chain, Brian J. Tindall, Jim Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

30 Scopus citations

Abstract

Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino- synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo- nocardineae. A. mirum is characterized by its motile spores borne on synnemata and as a producer of nocardicin antibiotics. It is capable of growing aerobically and under a moderate CO 2 atmosphere. The strain is a Gram-positive, aerial and substrate mycelium producing bacterium, originally isolated from a grass blade collected from the Raritan River, New Jersey. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Actinosynnemataceae, and only the second sequence from the actinobacterial suborder Pseudonocardineae. The 8,248,144 bp long single replicon genome with its 7100 protein- coding and 77 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)46-53
Number of pages8
JournalStandards in Genomic Sciences
Volume1
Issue number1
DOIs
StatePublished - 2009

Keywords

  • Actinosynnemataceae
  • Aerial and substrate mycelium
  • Aerobic
  • Mesophile
  • Motile spores
  • Nocardicin a producer
  • Soluble pigments
  • Synnemata

ASJC Scopus subject areas

  • Genetics

Fingerprint Dive into the research topics of 'Complete genome sequence of Actinosynnema mirum type strain (101 <sup>T</sup>)'. Together they form a unique fingerprint.

  • Cite this

    Land, M., Lapidus, A., Mayilraj, S., Chen, F., Copeland, A., del Rio, T. G., Nolan, M., Lucas, S., Tice, H., Cheng, J. F., Chertkov, O., Bruce, D., Goodwin, L., Pitluck, S., Rohde, M., Göker, M., Pati, A., Ivanova, N., Mavromatis, K., ... Klenk, H. P. (2009). Complete genome sequence of Actinosynnema mirum type strain (101 T). Standards in Genomic Sciences, 1(1), 46-53. https://doi.org/10.4056/sigs.21137