Complete genome sequence of acetohalobium Arabaticum type strain (Z-7288 T)

Johannes Sikorski, Alla Lapidus, Olga Chertkov, Susan Lucas, Alex Copeland, Tijana Glavina del Rio, Matt Nolan, Hope Tice, Jan Fang Cheng, Cliff Han, Evelyne Brambilla, Sam Pitluck, Konstantinos Liolios, Natalia Ivanova, Konstantinos Mavromatis, Natalia Mikhailova, Amrita Pati, David Bruce, Chris Detter, Roxanne TapiaLynne Goodwin, Amy Chen, Krishna Palaniappan, Miriam Land, Loren Hauser, Yun Juan Chang, Cynthia D. Jeffries, Manfred Rohde, Markus Göker, Stefan Spring, Tanja Woyke, James Bristow, Jonathan A Eisen, Victor Markowitz, Philip Hugenholtz, Nikos C. Kyrpides, Hans Peter Klenk

Research output: Contribution to journalArticle

13 Scopus citations

Abstract

Acetohalobium arabaticum Zhilina and Zavarzin 1990 is of special interest because of its physiology and its participation in the anaerobic C 1-trophic chain in hypersaline environ-ments. This is the first completed genome sequence of the family Halobacteroidaceae and only the second genome sequence in the order Halanaerobiales. The 2,469,596 bp long ge-nome with its 2,353 protein-coding and 90 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

Original languageEnglish (US)
Pages (from-to)57-65
Number of pages9
JournalStandards in Genomic Sciences
Volume3
Issue number1
DOIs
StatePublished - 2010

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Keywords

  • Anaerobe
  • Chemolithotroph
  • Clostridia
  • Consumption of trimethylamine
  • Degradation of betaine
  • GEBA
  • Halanae-robiales
  • Halophile
  • Homoacetogen
  • Mesophile
  • Methylotroph
  • Organotroph

ASJC Scopus subject areas

  • Genetics

Cite this

Sikorski, J., Lapidus, A., Chertkov, O., Lucas, S., Copeland, A., del Rio, T. G., Nolan, M., Tice, H., Cheng, J. F., Han, C., Brambilla, E., Pitluck, S., Liolios, K., Ivanova, N., Mavromatis, K., Mikhailova, N., Pati, A., Bruce, D., Detter, C., ... Klenk, H. P. (2010). Complete genome sequence of acetohalobium Arabaticum type strain (Z-7288 T). Standards in Genomic Sciences, 3(1), 57-65. https://doi.org/10.4056/sigs.1062906