Co-infection patterns of infectious salmon anaemia and sea lice in farmed Atlantic salmon, Salmo salar L., in southern Chile (2007-2009)

P. Valdes-Donoso, F. O. Mardones, M. Jarpa, M. Ulloa, Tim Carpenter, A. M. Perez

Research output: Contribution to journalArticle

29 Scopus citations


Infectious salmon anaemia virus (ISAV) caused a large epidemic in farmed Atlantic salmon in Chile in 2007-2009. Here, we assessed co-infection patterns of ISAV and sea lice (SL) based on surveillance data collected by the fish health authority. ISAV status and SL counts in all Atlantic salmon farms located in the 10th region of Chile were registered monthly from July 2007 through December 2009. Each farm was categorized monthly according to its ISAV and SL status. A multinomial time-space scan test using a circular window was applied to identify disease clusters, and a multivariate regression model was fitted to quantify the association between disease-clustering and farm-management factors. Most of the identified clusters (9/13) were associated with high SL burdens. There were significant associations (P < 0.05) between management factors and ISAV/SL status. Areas in which good management practices were associated with a reduced disease risk were identified. The findings of this study suggest that certain management practices can effectively reduce the risk of SL and ISAV in the face of an epidemic and will be helpful towards creating an effective disease control programme in Chile.

Original languageEnglish (US)
Pages (from-to)353-360
Number of pages8
JournalJournal of Fish Diseases
Issue number3
StatePublished - Mar 1 2013
Externally publishedYes



  • Chile
  • Infectious salmon anaemia
  • Multinomial logistic regression
  • Multinomial scan test
  • Salmon farming
  • Sea lice

ASJC Scopus subject areas

  • Aquatic Science
  • veterinary (miscalleneous)

Cite this