An interactive visual analysis tool for cellular behavior studies using large collections of microscopy videos

Chuan Wang; Jia Kai Chou; Kwan-Liu Ma; Arpad Karsai; Ying X. Liu; Evgeny Ogorodnik; Victoria Tran; Gang-yu Liu

doi:10.1109/BigMM.2016.67

An interactive visual analysis tool for cellular behavior studies using large collections of microscopy videos

Chuan Wang, Jia Kai Chou, Kwan-Liu Ma, Arpad Karsai, Ying X. Liu, Evgeny Ogorodnik, Victoria Tran, Gang-yu Liu

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

This paper presents an interactive visual analysis tool created for studying collections of video data. Our driving application is cellular behavior studies that use microscopy imaging methods. The studies routinely generate large amounts of videos with various experimental conditions. It is very time-consuming for the scientists to watch each video and manually extract features-of-interest for further comparative and quantitative studies. We show that with our visualization tool, scientists are now able to conveniently observe, select and isolate, and compare and analyze the cellular behaviors from different perspectives within one framework. The tremendous time and effort saved allow scientist to focus on deriving the actual meaning behind certain observed behaviors.

Original language	English (US)
Title of host publication	Proceedings - 2016 IEEE 2nd International Conference on Multimedia Big Data, BigMM 2016
Publisher	Institute of Electrical and Electronics Engineers Inc.
Pages	1-8
Number of pages	8
ISBN (Electronic)	9781509021789
DOIs	https://doi.org/10.1109/BigMM.2016.67
State	Published - Aug 16 2016
Event	2nd IEEE International Conference on Multimedia Big Data, BigMM 2016 - Taipei, Taiwan, Province of China Duration: Apr 20 2016 → Apr 22 2016

Other

Other	2nd IEEE International Conference on Multimedia Big Data, BigMM 2016
Country	Taiwan, Province of China
City	Taipei
Period	4/20/16 → 4/22/16

ASJC Scopus subject areas

Signal Processing
Information Systems
Media Technology

Access to Document

10.1109/BigMM.2016.67

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Cite this

Wang, C., Chou, J. K., Ma, K-L., Karsai, A., Liu, Y. X., Ogorodnik, E., Tran, V., & Liu, G. (2016). An interactive visual analysis tool for cellular behavior studies using large collections of microscopy videos. In Proceedings - 2016 IEEE 2nd International Conference on Multimedia Big Data, BigMM 2016 (pp. 1-8). [7544989] Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/BigMM.2016.67

An interactive visual analysis tool for cellular behavior studies using large collections of microscopy videos. / Wang, Chuan; Chou, Jia Kai; Ma, Kwan-Liu; Karsai, Arpad; Liu, Ying X.; Ogorodnik, Evgeny; Tran, Victoria; Liu, Gang-yu.

Proceedings - 2016 IEEE 2nd International Conference on Multimedia Big Data, BigMM 2016. Institute of Electrical and Electronics Engineers Inc., 2016. p. 1-8 7544989.

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Wang, C, Chou, JK, Ma, K-L, Karsai, A, Liu, YX, Ogorodnik, E, Tran, V & Liu, G 2016, An interactive visual analysis tool for cellular behavior studies using large collections of microscopy videos. in Proceedings - 2016 IEEE 2nd International Conference on Multimedia Big Data, BigMM 2016., 7544989, Institute of Electrical and Electronics Engineers Inc., pp. 1-8, 2nd IEEE International Conference on Multimedia Big Data, BigMM 2016, Taipei, Taiwan, Province of China, 4/20/16. https://doi.org/10.1109/BigMM.2016.67

Wang C, Chou JK, Ma K-L, Karsai A, Liu YX, Ogorodnik E et al. An interactive visual analysis tool for cellular behavior studies using large collections of microscopy videos. In Proceedings - 2016 IEEE 2nd International Conference on Multimedia Big Data, BigMM 2016. Institute of Electrical and Electronics Engineers Inc. 2016. p. 1-8. 7544989 https://doi.org/10.1109/BigMM.2016.67

Wang, Chuan ; Chou, Jia Kai ; Ma, Kwan-Liu ; Karsai, Arpad ; Liu, Ying X. ; Ogorodnik, Evgeny ; Tran, Victoria ; Liu, Gang-yu. / An interactive visual analysis tool for cellular behavior studies using large collections of microscopy videos. Proceedings - 2016 IEEE 2nd International Conference on Multimedia Big Data, BigMM 2016. Institute of Electrical and Electronics Engineers Inc., 2016. pp. 1-8

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