A Fluorescent Adenosine Analogue as a Substrate for an A-to-I RNA Editing Enzyme

Rena A. Mizrahi, Dongwon Shin, Renatus W. Sinkeldam, Kelly J. Phelps, Andrea Fin, Dean J. Tantillo, Yitzhak Tor, Peter A. Beal

Research output: Contribution to journalArticle

17 Citations (Scopus)

Abstract

Adenosine to inosine RNA editing catalyzed by ADAR enzymes is common in humans, and altered editing is associated with disease. Experiments using substrate RNAs with adenosine analogues at editing sites are useful for defining features of the ADAR reaction mechanism. The reactivity of ADAR2 was evaluated with RNA containing the emissive adenosine analogue thieno[3,4-d]-6-aminopyrimidine (thA). This nucleoside was incorporated into a mimic of the glutamate receptor B (GluR B) mRNA R/G editing site. We found that thA is recognized by AMV reverse transcriptase as A, and is deaminated rapidly by human ADAR2 to give thI. Importantly, ADAR reaction progress can be monitored by following the deamination-induced change in fluorescence of the thA-modified RNA. The observed high thA reactivity adds to our understanding of the structural features that are necessary for an efficient hADAR2 reaction. Furthermore, the new fluorescent assay is expected to accelerate mechanistic studies of ADARs.

Original languageEnglish (US)
Pages (from-to)8713-8716
Number of pages4
JournalAngewandte Chemie - International Edition
Volume54
Issue number30
DOIs
StatePublished - Jul 20 2015

Fingerprint

RNA
Adenosine
Enzymes
Substrates
Inosine
RNA-Directed DNA Polymerase
Nucleosides
Assays
Fluorescence
Messenger RNA
immune RNA
Experiments

Keywords

  • ADAR enzymes
  • adenosine deaminase
  • fluorescent nucleosides
  • RNA editing

ASJC Scopus subject areas

  • Chemistry(all)
  • Catalysis

Cite this

Mizrahi, R. A., Shin, D., Sinkeldam, R. W., Phelps, K. J., Fin, A., Tantillo, D. J., ... Beal, P. A. (2015). A Fluorescent Adenosine Analogue as a Substrate for an A-to-I RNA Editing Enzyme. Angewandte Chemie - International Edition, 54(30), 8713-8716. https://doi.org/10.1002/anie.201502070

A Fluorescent Adenosine Analogue as a Substrate for an A-to-I RNA Editing Enzyme. / Mizrahi, Rena A.; Shin, Dongwon; Sinkeldam, Renatus W.; Phelps, Kelly J.; Fin, Andrea; Tantillo, Dean J.; Tor, Yitzhak; Beal, Peter A.

In: Angewandte Chemie - International Edition, Vol. 54, No. 30, 20.07.2015, p. 8713-8716.

Research output: Contribution to journalArticle

Mizrahi, RA, Shin, D, Sinkeldam, RW, Phelps, KJ, Fin, A, Tantillo, DJ, Tor, Y & Beal, PA 2015, 'A Fluorescent Adenosine Analogue as a Substrate for an A-to-I RNA Editing Enzyme', Angewandte Chemie - International Edition, vol. 54, no. 30, pp. 8713-8716. https://doi.org/10.1002/anie.201502070
Mizrahi, Rena A. ; Shin, Dongwon ; Sinkeldam, Renatus W. ; Phelps, Kelly J. ; Fin, Andrea ; Tantillo, Dean J. ; Tor, Yitzhak ; Beal, Peter A. / A Fluorescent Adenosine Analogue as a Substrate for an A-to-I RNA Editing Enzyme. In: Angewandte Chemie - International Edition. 2015 ; Vol. 54, No. 30. pp. 8713-8716.
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