A flexible, open, decentralized system for digital pathology networks

Robert Schuler; David E. Smith; Gowri Kumaraguruparan; Ann Chervenak; Anne D. Lewis; Dallas M. Hyde; Carl Kesselman

doi:10.3233/978-1-61499-054-3-29

A flexible, open, decentralized system for digital pathology networks

Robert Schuler, David E. Smith, Gowri Kumaraguruparan, Ann Chervenak, Anne D. Lewis, Dallas M. Hyde, Carl Kesselman

Anatomy, Physiology and Cell Biology

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

4 Scopus citations

Abstract

High-resolution digital imaging is enabling digital archiving and sharing of digitized microscopy slides and new methods for digital pathology. Collaborative research centers, outsourced medical services, and multi-site organizations stand to benefit from sharing pathology data in a digital pathology network. Yet significant technological challenges remain due to the large size and volume of digitized whole slide images. While information systems do exist for managing local pathology laboratories, they tend to be oriented toward narrow clinical use cases or offer closed ecosystems around proprietary formats. Few solutions exist for networking digital pathology operations. Here we present a system architecture and implementation of a digital pathology network and share results from a production system that federates major research centers.

Original language	English (US)
Title of host publication	Studies in Health Technology and Informatics
Pages	29-38
Number of pages	10
Volume	175
DOIs	https://doi.org/10.3233/978-1-61499-054-3-29
State	Published - 2012
Event	10th HealthGrid Conference and the 4th International Workshop on Science Gateways for Life Sciences, IWSG-Life 2012 - Amsterdam, Netherlands Duration: May 21 2012 → May 25 2012

Other

Other	10th HealthGrid Conference and the 4th International Workshop on Science Gateways for Life Sciences, IWSG-Life 2012
Country	Netherlands
City	Amsterdam
Period	5/21/12 → 5/25/12

Keywords

Data federation
Data integration
DICOM
Digital pathology
Digital pathology network
Virtual microscopy
Whole slide image

ASJC Scopus subject areas

Biomedical Engineering
Health Informatics
Health Information Management

Access to Document

10.3233/978-1-61499-054-3-29

Fingerprint Dive into the research topics of 'A flexible, open, decentralized system for digital pathology networks'. Together they form a unique fingerprint.

Cite this

Schuler, R., Smith, D. E., Kumaraguruparan, G., Chervenak, A., Lewis, A. D., Hyde, D. M., & Kesselman, C. (2012). A flexible, open, decentralized system for digital pathology networks. In Studies in Health Technology and Informatics (Vol. 175, pp. 29-38) https://doi.org/10.3233/978-1-61499-054-3-29

Schuler, R, Smith, DE, Kumaraguruparan, G, Chervenak, A, Lewis, AD, Hyde, DM & Kesselman, C 2012, A flexible, open, decentralized system for digital pathology networks. in Studies in Health Technology and Informatics. vol. 175, pp. 29-38, 10th HealthGrid Conference and the 4th International Workshop on Science Gateways for Life Sciences, IWSG-Life 2012, Amsterdam, Netherlands, 5/21/12. https://doi.org/10.3233/978-1-61499-054-3-29

@inproceedings{ff99709613054d4e82c4bfc6baf5e628,

title = "A flexible, open, decentralized system for digital pathology networks",

abstract = "High-resolution digital imaging is enabling digital archiving and sharing of digitized microscopy slides and new methods for digital pathology. Collaborative research centers, outsourced medical services, and multi-site organizations stand to benefit from sharing pathology data in a digital pathology network. Yet significant technological challenges remain due to the large size and volume of digitized whole slide images. While information systems do exist for managing local pathology laboratories, they tend to be oriented toward narrow clinical use cases or offer closed ecosystems around proprietary formats. Few solutions exist for networking digital pathology operations. Here we present a system architecture and implementation of a digital pathology network and share results from a production system that federates major research centers.",

keywords = "Data federation, Data integration, DICOM, Digital pathology, Digital pathology network, Virtual microscopy, Whole slide image",

author = "Robert Schuler and Smith, {David E.} and Gowri Kumaraguruparan and Ann Chervenak and Lewis, {Anne D.} and Hyde, {Dallas M.} and Carl Kesselman",

year = "2012",

doi = "10.3233/978-1-61499-054-3-29",

language = "English (US)",

isbn = "9781614990536",

volume = "175",

pages = "29--38",

booktitle = "Studies in Health Technology and Informatics",

note = "10th HealthGrid Conference and the 4th International Workshop on Science Gateways for Life Sciences, IWSG-Life 2012 ; Conference date: 21-05-2012 Through 25-05-2012",

}

TY - GEN

T1 - A flexible, open, decentralized system for digital pathology networks

AU - Schuler, Robert

AU - Smith, David E.

AU - Kumaraguruparan, Gowri

AU - Chervenak, Ann

AU - Lewis, Anne D.

AU - Hyde, Dallas M.

AU - Kesselman, Carl

PY - 2012

Y1 - 2012

N2 - High-resolution digital imaging is enabling digital archiving and sharing of digitized microscopy slides and new methods for digital pathology. Collaborative research centers, outsourced medical services, and multi-site organizations stand to benefit from sharing pathology data in a digital pathology network. Yet significant technological challenges remain due to the large size and volume of digitized whole slide images. While information systems do exist for managing local pathology laboratories, they tend to be oriented toward narrow clinical use cases or offer closed ecosystems around proprietary formats. Few solutions exist for networking digital pathology operations. Here we present a system architecture and implementation of a digital pathology network and share results from a production system that federates major research centers.

AB - High-resolution digital imaging is enabling digital archiving and sharing of digitized microscopy slides and new methods for digital pathology. Collaborative research centers, outsourced medical services, and multi-site organizations stand to benefit from sharing pathology data in a digital pathology network. Yet significant technological challenges remain due to the large size and volume of digitized whole slide images. While information systems do exist for managing local pathology laboratories, they tend to be oriented toward narrow clinical use cases or offer closed ecosystems around proprietary formats. Few solutions exist for networking digital pathology operations. Here we present a system architecture and implementation of a digital pathology network and share results from a production system that federates major research centers.

KW - Data federation

KW - Data integration

KW - DICOM

KW - Digital pathology

KW - Digital pathology network

KW - Virtual microscopy

KW - Whole slide image

UR - http://www.scopus.com/inward/record.url?scp=84866771920&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=84866771920&partnerID=8YFLogxK

U2 - 10.3233/978-1-61499-054-3-29

DO - 10.3233/978-1-61499-054-3-29

M3 - Conference contribution

C2 - 22941985

AN - SCOPUS:84866771920

SN - 9781614990536

VL - 175

SP - 29

EP - 38

BT - Studies in Health Technology and Informatics

T2 - 10th HealthGrid Conference and the 4th International Workshop on Science Gateways for Life Sciences, IWSG-Life 2012

Y2 - 21 May 2012 through 25 May 2012

ER -