A continuous, regenerative coupled GTPase assay for dynamin-related proteins

Elena Ingerman, Jodi Nunnari

Research output: Contribution to journalArticle

43 Citations (Scopus)

Abstract

Dynamin-related proteins (DRPs) compose a diverse family of proteins that function, through GTPase stimulated self-assembly, to remodel cellular membranes. The molecular mechanism by which DRPs mediate membrane remodeling events and the specific role of their GTPase cycle is still not fully understood. Although DRPs are members of the GTPase superfamily, they possess unique kinetic properties. In particular, they have relatively low affinity for guanine nucleotides and, under conditions that favor self-assembly, they have high rates of GTP turnover. Established fixed time point assays used for the analysis of assembly stimulated GTPase activity are prone to inaccuracies due to substrate depletion and are also limited by lack of time resolution. We describe a simple, continuous, coupled GTP regenerating assay that tackles the limitations of the fixed time point assays and can be used for the kinetic analysis of DRP GTP hydrolysis under unassembled and assembled conditions.

Original languageEnglish (US)
Article number53
Pages (from-to)611-619
Number of pages9
JournalMethods in Enzymology
Volume404
DOIs
StatePublished - 2006

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Dynamins
GTP Phosphohydrolases
Assays
Guanosine Triphosphate
Self assembly
Proteins
Kinetics
Guanine Nucleotides
Hydrolysis
Membrane Proteins
Membranes
Substrates

ASJC Scopus subject areas

  • Biochemistry

Cite this

A continuous, regenerative coupled GTPase assay for dynamin-related proteins. / Ingerman, Elena; Nunnari, Jodi.

In: Methods in Enzymology, Vol. 404, 53, 2006, p. 611-619.

Research output: Contribution to journalArticle

Ingerman, Elena ; Nunnari, Jodi. / A continuous, regenerative coupled GTPase assay for dynamin-related proteins. In: Methods in Enzymology. 2006 ; Vol. 404. pp. 611-619.
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