Find Research Outputs

2019
1 Citation (Scopus)

3D-printed breast phantom for multi-purpose and multi-modality imaging

He, Y., Liu, Y., Dyer, B. A., Boone, J. M., Liu, S., Chen, T., Zheng, F., Zhu, Y., Sun, Y., Rong, Y. & Qiu, J., Jan 1 2019, In : Quantitative Imaging in Medicine and Surgery. 9, 1, p. 63-74 12 p.

Research output: Contribution to journalArticle

Breast
Calcinosis
Magnetic Resonance Imaging
Quality Control
Technology

A 17-gene Panel for Prediction of Adverse Prostate Cancer Pathologic Features: Prospective Clinical Validation and Utility

Eggener, S., Karsh, L. I., Richardson, T., Shindel, A. W., Lu, R., Rosenberg, S., Goldfischer, E., Korman, H., Bennett, J., Newmark, J. & Denes, B. S., Jan 1 2019, In : Urology.

Research output: Contribution to journalArticle

Prostate
Prostatic Neoplasms
Genes
Prostatectomy
Neoplasm Grading

A 51-Year-Old Man With Unresolved Pulmonary Infiltrates Following Streptococcus pneumoniae Pneumonia

Pugashetti, J. V., Adams, J. Y., Zeki, A. & Kuhn, B., Feb 1 2019, In : Chest. 155, 2, p. e47-e50

Research output: Contribution to journalArticle

Streptococcus pneumoniae
Pneumonia
Lung
Levofloxacin
Sinusitis

A Case for n-of-1 Trials - Reply

Kravitz, R. L., Sim, I. & Duan, N., Mar 1 2019, In : JAMA Internal Medicine. 179, 3, 1 p.

Research output: Contribution to journalLetter

1 Citation (Scopus)

Acceptance versus reappraisal: Behavioral, autonomic, and neural effects

Goldin, P. R., Moodie, C. A. & Gross, J. J., Jan 1 2019, (Accepted/In press) In : Cognitive, Affective and Behavioral Neuroscience.

Research output: Contribution to journalArticle

Autonomic Agents
Emotions
Brain
Respiratory Rate
Heart Rate

Acinetobacter baumannii OxyR Regulates the Transcriptional Response to Hydrogen Peroxide

Juttukonda, L. J., Green, E. R., Lonergan, Z. R., Heffern, M., Chang, C. J. & Skaar, E. P., Jan 1 2019, In : Infection and Immunity. 87, 1

Research output: Contribution to journalArticle

Acinetobacter baumannii
Hydrogen Peroxide
Infection
Acinetobacter Infections
Lung

A Combination Flap for Repair of Eclabium

Joo, J. S., Petukhova, T. & Eisen, D. B., Feb 1 2019, In : Dermatologic surgery : official publication for American Society for Dermatologic Surgery [et al.]. 45, 2, p. 291-293 3 p.

Research output: Contribution to journalArticle

A combined hiPSC-derived endothelial cell and in vitro microfluidic platform for assessing biomaterial-based angiogenesis

Natividad-Diaz, S. L., Browne, S., Jha, A. K., Ma, Z., Hossainy, S., Kurokawa, Y. K., George, S. & Healy, K. E., Feb 1 2019, In : Biomaterials. 194, p. 73-83 11 p.

Research output: Contribution to journalArticle

Induced Pluripotent Stem Cells
Microfluidics
Endothelial cells
Biocompatible Materials
Stem cells

A comparison of automated segmentation and manual tracing in estimating hippocampal volume in ischemic stroke and healthy control participants

Khlif, M. S., Egorova, N., Werden, E., Redolfi, A., Bocardi, M., DeCarli, C., Fletcher, E., Singh, B., Li, Q., Bird, L. & Brodtmann, A., Jan 1 2019, (Accepted/In press) In : NeuroImage: Clinical. 101581.

Research output: Contribution to journalArticle

Healthy Volunteers
Atlases
Stroke
Anatomy
Stroke Volume
Cannabis
Acute Coronary Syndrome
Toxicology
Percutaneous Coronary Intervention
Accelerated Idioventricular Rhythm

Acute infection and subsequent subclinical reactivation of herpes simplex virus 2 after vaginal inoculation of rhesus macaques

Lo, M., Zhu, J., Hansen, S. G., Carroll, T., Zuend, C. F., Nöel-Romas, L., Ma, Z. M., Fritts, L., Huang, M. L., Sun, S., Huang, Y., Koelle, D. M., Picker, L. J., Burgener, A., Corey, L. & Miller, C. J., Jan 1 2019, In : Journal of Virology. 93, 2, e01574-18.

Research output: Contribution to journalArticle

Human herpesvirus 2
Asymptomatic Infections
Human Herpesvirus 2
Macaca mulatta
infection

Acute lead arsenate poisoning in beef cattle in Uruguay

Schild, C. O., Giannitti, F., Medeiros, R. M. T., da Silva Silveira, C., Caffarena, R. D., Poppenga, R. H. & Riet-Correa, F., Jan 1 2019, In : Journal of Veterinary Diagnostic Investigation.

Research output: Contribution to journalArticle

lead arsenate
Uruguay
Lead Poisoning
lesions (animal)
beef cattle

Adaptive task difficulty influences neural plasticity and transfer of training

Flegal, K. E., Ragland, J. D. & Ranganath, C., Mar 1 2019, In : NeuroImage. 188, p. 111-121 11 p.

Research output: Contribution to journalArticle

Neuronal Plasticity
Short-Term Memory
Episodic Memory
Brain
Hippocampus

A demonstration of modularity, reuse, reproducibility, portability and scalability for modeling and simulation of cardiac electrophysiology using Kepler Workflows

Yang, P. C., Purawat, S., Ieong, P. U., Jeng, M. T., DeMarco, K. R., Vorobyov, I., McCulloch, A. D., Altintas, I., Amaro, R. E. & Clancy, C. E., Mar 1 2019, In : PLoS computational biology. 15, 3, p. e1006856

Research output: Contribution to journalArticle

Open Access
Cardiac Electrophysiology
electrophysiology
Kepler
Workflow
Portability

Advances in therapeutic endoscopy

Tejaswi, S. L., Girotra, M., Lima, J. P. & Tabibian, J. H., Jan 1 2019, In : Gastroenterology Research and Practice. 2019, 6253837.

Research output: Contribution to journalEditorial

Open Access

Afatinib With Pembrolizumab for Treatment of Patients With Locally Advanced/Metastatic Squamous Cell Carcinoma of the Lung: The LUX-Lung IO/KEYNOTE 497 Study Protocol

Levy, B., Paz-Ares, L., Bennouna, J., Felip, E., Abreu, D. R., Isla, D., Barlesi, F., Molinier, O., Madelaine, J., Audigier-Valette, C., Kim, S. W., Kim, H. R., Ozguroglu, M., Erman, M., Badin, F. B., Mekhail, T. M., Scheff, R., Chisamore, M. J., Sadrolhefazi, B. & Riess, J., Jan 1 2019, In : Clinical lung cancer.

Research output: Contribution to journalArticle

Open Access
Squamous Cell Carcinoma
Lung
Safety
Epidermal Growth Factor Receptor
Survival

Affinity selection and sequencing

Lam, K., Apr 1 2019, In : Nature Chemical Biology. 15, 4, p. 320-321 2 p.

Research output: Contribution to journalArticle

Libraries
Peptide Library
Peptides
Tandem Mass Spectrometry
Gel Chromatography
Head and Neck Neoplasms
Practice Guidelines
Malnutrition
Guidelines
Neoplasms

Algae-derived β-glucan enhanced gut health and immune responses of weaned pigs experimentally infected with a pathogenic E. coli

Kim, K., Ehrlich, A., Perng, V., Chase, J. A., Raybould, H. E., Li, X., Atwill, E. R., Whelan, R., Sokale, A. & Liu, Y., Feb 1 2019, In : Animal Feed Science and Technology. 248, p. 114-125 12 p.

Research output: Contribution to journalArticle

algae
glucans
digestive system
immune response
Escherichia coli

Alginate Hydrogel Modified with a Ligand Interacting with α3β1 Integrin Receptor Promotes the Differentiation of 3D Neural Spheroids toward Oligodendrocytes in Vitro

Wen, H., Xiao, W., Biswas, S., Cong, Z. Q., Liu, X. M., Lam, K. S., Liao, Y. H. & Deng, W., Jan 1 2019, In : ACS Applied Materials and Interfaces.

Research output: Contribution to journalArticle

Hydrogel
Alginate
Hydrogels
Integrins
Ligands

All-in-One Iontronic Sensing Paper

Li, S., Pan, N., Zhu, Z., Li, R., Li, B., Chu, J., Li, G., Chang, Y. & Pan, T., Jan 1 2019, (Accepted/In press) In : Advanced Functional Materials. 1807343.

Research output: Contribution to journalArticle

Gluing
Printing
Packaging
Health
Substrates
Gait
Stroke
Muscles
Electromyography
Population

Alveolar macrophage reaction to PM 2.5 of hazy day in vitro: Evaluation methods and mitochondrial screening to determine mechanisms of biological effect

Wei, H., Zhang, Y., Song, S., Pinkerton, K. E., Geng, H. & Ro, C. U., Jun 15 2019, In : Ecotoxicology and Environmental Safety. 174, p. 566-573 8 p.

Research output: Contribution to journalArticle

Polycyclic Aromatic Hydrocarbons
Alveolar Macrophages
Mitochondrial Dynamics
Polycyclic aromatic hydrocarbons
Screening
4 Citations (Scopus)

Amino Acid Dysregulation Metabotypes: Potential Biomarkers for Diagnosis and Individualized Treatment for Subtypes of Autism Spectrum Disorder

Smith, A. M., King, J. J., West, P. R., Ludwig, M. A., Donley, E. L. R., Burrier, R. E. & Amaral, D. G., Feb 15 2019, In : Biological Psychiatry. 85, 4, p. 345-354 10 p.

Research output: Contribution to journalArticle

Biomarkers
Amino Acids
Branched Chain Amino Acids
Autistic Disorder
Metabolome

Amino acid status in dogs with protein-losing nephropathy

Parker, V. J., Fascetti, A. J. & Klamer, B. G., Jan 1 2019, In : Journal of Veterinary Internal Medicine.

Research output: Contribution to journalArticle

Open Access
kidney diseases
Dogs
Amino Acids
amino acids
dogs

A Modern Reaffirmation of Surgery as the Optimal Treatment for Solitary Fibrous Tumors of the Pleura

Yao, M. J., Ding, L., Atay, S. M., Toubat, O., Ebner, P., David, E., McFadden, P. M. & Kim, A. W., Jan 1 2019, (Accepted/In press) In : Annals of Thoracic Surgery.

Research output: Contribution to journalArticle

Pleural Solitary Fibrous Tumor
Survival
Therapeutics
Pneumonectomy

A multicenter study of ketamine effects on functional connectivity: Large scale network relationships, hubs and symptom mechanisms

Fleming, L. M., Javitt, D. C., Carter, C. S., Kantrowitz, J. T., Girgis, R. R., Kegeles, L. S., Ragland, J. D., Maddock, R. J., Lesh, T. A., Tanase, C., Robinson, J., Potter, W. Z., Carlson, M., Wall, M. M., Choo, T. H., Grinband, J., Lieberman, J., Krystal, J. H. & Corlett, P. R., Jan 1 2019, In : NeuroImage: Clinical. 22, 101739.

Research output: Contribution to journalArticle

Open Access
Ketamine
Multicenter Studies
Schizophrenia
Prefrontal Cortex
Excitatory Amino Acid Antagonists

An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar

Grubaugh, N. D., Gangavarapu, K., Quick, J., Matteson, N. L., De Jesus, J. G., Main, B., Tan, A. L., Paul, L. M., Brackney, D. E., Grewal, S., Gurfield, N., Van Rompay, K. K. A., Isern, S., Michael, S. F., Schneider, L. L., Loman, N. J. & Andersen, K. G., Jan 8 2019, In : Genome Biology. 20, 1, 8.

Research output: Contribution to journalArticle

virus
Viruses
viruses
Nanopores
West Nile virus

An atypical presentation of multi-systemic B-cell lymphoma in a horse

Torrent, A., Kilcoyne, I., Johnson, A., Affolter, V. K., Berryhill, E. & Aleman, M. R., Mar 1 2019, In : The Canadian veterinary journal = La revue veterinaire canadienne. 60, 3, p. 300-304 5 p.

Research output: Contribution to journalArticle

muscular atrophy
Muscular Atrophy
B-Cell Lymphoma
lymphoma
limbs (animal)

An economic analysis of a contingency model utilising vaccination for the control of equine influenza in a non-endemic country

Rosanowski, S. M., Carpenter, T., Adamson, D., Rogers, C. W., Pearce, P., Burns, M. & Cogger, N., Jan 1 2019, In : PLoS One. 14, 1, e0210885.

Research output: Contribution to journalArticle

equine influenza
Economic analysis
economic analysis
Human Influenza
Horses
Open Access
Epithelial Cells
Adenosine Triphosphate
Pharmacology
Cell Movement
Cues
1 Citation (Scopus)

An exploratory longitudinal study of social and language outcomes in children with autism in bilingual home environments

Zhou, V., Munson, J. A., Greenson, J., Hou, Y., Rogers, S. J. & Estes, A. M., Feb 1 2019, In : Autism. 23, 2, p. 394-404 11 p.

Research output: Contribution to journalArticle

Autistic Disorder
Longitudinal Studies
Language
Group Homes
Gestures

Angry and fearful face conflict effects in post-traumatic stress disorder

Ashley, V. & Swick, D., Feb 5 2019, In : Frontiers in Psychology. 10, FEB, 136.

Research output: Contribution to journalArticle

Post-Traumatic Stress Disorders
Emotions
Facial Expression
Conflict (Psychology)
Self Report

An introduction to hardware, software, and other information technology needs of biomedical biobanks

Im, K., Gui, D. & Yong, W. H., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 17-29 13 p. (Methods in Molecular Biology; vol. 1897).

Research output: Chapter in Book/Report/Conference proceedingChapter

Biomedical Technology
Biomedical Research
Software
Informatics
Translational Medical Research

ANKHD1 is required for SMYD3 to promote tumor metastasis in hepatocellular carcinoma

Zhou, Z., Jiang, H., Tu, K., Yu, W., Zhang, J., Hu, Z., Zhang, H., Hao, D., Huang, P., Wang, J., Wang, A., Xiao, Z. & He, C., Jan 15 2019, In : Journal of Experimental and Clinical Cancer Research. 38, 1, 18.

Research output: Contribution to journalArticle

Hepatocellular Carcinoma
Neoplasm Metastasis
Neoplasms
Mass Spectrometry
Immunohistochemistry
2 Citations (Scopus)

A nonhuman primate model of inherited retinal disease

Moshiri, A., Chen, R., Kim, S., Harris, R. A., Li, Y., Raveendran, M., Davis, S., Liang, Q., Pomerantz, O., Wang, J., Garzel, L., Cameron, A., Yiu, G. C., Stout, J. T., Huang, Y., Murphy, C. J., Roberts, J. A., Gopalakrishna, K. N., Boyd, K., Artemyev, N. O. & 2 othersRogers, J. & Thomasy, S. M., Feb 1 2019, In : Journal of Clinical Investigation. 129, 2, p. 863-874 12 p.

Research output: Contribution to journalArticle

Retinal Diseases
Color Vision Defects
Primates
Light Signal Transduction
Retinal Degeneration

A novel method for measuring learning opportunities provided by parents to young children with autism spectrum disorder

Davlantis, K. S., Estes, A., Dawson, G. & Rogers, S. J., Jan 1 2019, (Accepted/In press) In : Autism.

Research output: Contribution to journalArticle

Parents
Learning
Vocabulary
Least-Squares Analysis
Psychometrics

Antibodies and venom peptides: new modalities for ion channels

Wulff, H., Christophersen, P., Colussi, P., Chandy, K. G. & Yarov-Yarovoy, V., Jan 1 2019, In : Nature Reviews Drug Discovery.

Research output: Contribution to journalReview article

Venoms
Ion Channels
Peptides
Antibodies
Biological Products

Anti-Müllerian hormone and ovarian aging in mares

Uliani, R. C., Conley, A. J., Jo Corbin, C., Friso, A. M., Maciel, L. F. S. & Alvarenga, M. A., Feb 1 2019, In : Journal of Endocrinology. 240, 2, p. 147-156 10 p.

Research output: Contribution to journalArticle

Hormones
Ovariectomy
Horses
Hypertrophy
Fertility

Anti-RNA binding protein positivity in idiopathic interstitial pneumonia

Bermea, R. S., Adegunsoye, A., Oldham, J., Ventura, I., Lee, C., Chung, J. H., Montner, S., Noth, I., Strek, M. E. & Vij, R., Jan 1 2019, In : Respiratory Medicine. 146, p. 23-27 5 p.

Research output: Contribution to journalArticle

Idiopathic Interstitial Pneumonias
RNA-Binding Proteins
Pulmonary Hypertension
Survival
Antibodies

A one health perspective on dairy production and dairy food safety

Garcia, S. N., Osburn, B. I. & Cullor, J. S., Jun 1 2019, In : One Health. 7, 100086.

Research output: Contribution to journalReview article

Open Access
Food Safety
Dairying
Dairy Products
Food
Health

Aperture phase modulation with adaptive optics: A novel approach for speckle reduction and structure extraction in optical coherence tomography

Zhang, P., Manna, S. K., Miller, E. B., Jian, Y., Meleppat, R. K., Sarunic, M. V., Pugh Jr, E. N. & Zawadzki, R., Jan 1 2019, In : Biomedical Optics Express. 10, 2, p. 552-570 19 p.

Research output: Contribution to journalArticle

Optical Coherence Tomography
adaptive optics
phase modulation
tomography
apertures

A Pilot Study of Vinorelbine Safety and Pharmacokinetics in Patients with Varying Degrees of Liver Dysfunction

Gong, J., Cho, M., Gupta, R., Synold, T. W., Frankel, P., Ruel, C., Fakih, M., Chung, V., Lim, D. & Chao, J., Jan 1 2019, In : Oncologist.

Research output: Contribution to journalArticle

Liver Diseases
Pharmacokinetics
Safety
Liver
Indocyanine Green

Apocrine gland anal sac adenocarcinoma in cats: 30 cases (1994-2015)

Amsellem, P. M., Cavanaugh, R. P., Chou, P. Y., Bacon, N. J., Schallberger, S. P., Farese, J. P., Kuntz, C. A., Liptak, J. M., Culp, W. T., Robat, C. S. & Powers, B. E., Mar 15 2019, In : Journal of the American Veterinary Medical Association. 254, 6, p. 716-722 7 p.

Research output: Contribution to journalArticle

Anal Sacs
Apocrine Glands
anal glands
adenocarcinoma
Adenocarcinoma

A principal component analysis-based framework for statistical modeling of bone displacement during wrist maneuvers

Foster, B. H., Shaw, C. B., Boutin, R. D., Joshi, A. A., Bayne, C., Szabo, R. M. & Chaudhari, A., Mar 6 2019, In : Journal of Biomechanics. 85, p. 173-181 9 p.

Research output: Contribution to journalArticle

Principal Component Analysis
Wrist
Principal component analysis
Bone
Bone and Bones

A Randomized Controlled Trial of Exercise to Prevent Bone Loss in Premenopausal Women with Breast Cancer

Tabatabai, L. S., Bloom, J., Stewart, S. L. & Sellmeyer, D. E., Jan 1 2019, In : Journal of Women's Health. 28, 1, p. 87-92 6 p.

Research output: Contribution to journalArticle

Randomized Controlled Trials
Exercise
Breast Neoplasms
Bone and Bones
Bone Density

A rapid-throughput adaptable method for determining the monosaccharide composition of polysaccharides

Amicucci, M. J., Galermo, A. G., Nandita, E., Vo, T. T. T., Liu, Y., Lee, M., Xu, G. & Lebrilla, C. B., Apr 1 2019, In : International Journal of Mass Spectrometry. 438, p. 22-28 7 p.

Research output: Contribution to journalArticle

monosaccharides
Monosaccharides
polysaccharides
Polysaccharides
Throughput
Amniotic Fluid
Cell- and Tissue-Based Therapy
Mesenchymal Stromal Cells
Stem Cells
Bone Marrow

A review of canine B cell clonality assays and primer set optimization using large-scale repertoire data

Hwang, M. H., Darzentas, N., Bienzle, D., Moore, P. F., Guscetti, F., Morrison, J. & Keller, S. M., Mar 1 2019, In : Veterinary Immunology and Immunopathology. 209, p. 45-52 8 p.

Research output: Contribution to journalArticle

Antigen Receptors
Computer Simulation
B-lymphocytes
Sequence Analysis
Canidae

Are we ready for the CARE Act? Family caregiving education for health care providers

Badovinac, L. M., Nicolaysen, L. & Harvath, T. A., Mar 1 2019, In : Journal of Gerontological Nursing. 45, 3, p. 7-11 5 p.

Research output: Contribution to journalArticle

Health Personnel
Caregivers
Education
State Hospitals
Nursing